Glt8d1 (glycosyltransferase 8 domain containing 1) - Rat Genome Database

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Gene: Glt8d1 (glycosyltransferase 8 domain containing 1) Mus musculus
Analyze
Symbol: Glt8d1
Name: glycosyltransferase 8 domain containing 1
RGD ID: 1550632
MGI Page MGI
Description: Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human GLT8D1 (glycosyltransferase 8 domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2410004H05Rik; 5430414N14Rik; AI450005; glycosyltransferase 8 domain-containing protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,723,137 - 30,733,948 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,723,357 - 30,733,948 (+)EnsemblGRCm39 Ensembl
GRCm381431,001,197 - 31,012,441 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,001,400 - 31,011,991 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,814,579 - 31,825,627 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,830,713 - 29,840,994 (+)NCBIMGSCv36mm8
Celera1427,259,208 - 27,270,258 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18799693   PMID:20562862  
PMID:21267068   PMID:21873635   PMID:28378742   PMID:29483533  


Genomics

Comparative Map Data
Glt8d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,723,137 - 30,733,948 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,723,357 - 30,733,948 (+)EnsemblGRCm39 Ensembl
GRCm381431,001,197 - 31,012,441 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,001,400 - 31,011,991 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,814,579 - 31,825,627 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,830,713 - 29,840,994 (+)NCBIMGSCv36mm8
Celera1427,259,208 - 27,270,258 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
GLT8D1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38352,694,486 - 52,705,791 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl352,694,486 - 52,706,032 (-)EnsemblGRCh38hg38GRCh38
GRCh37352,728,502 - 52,739,807 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,703,544 - 52,715,088 (-)NCBINCBI36Build 36hg18NCBI36
Build 34352,703,544 - 52,712,662NCBI
Celera352,707,215 - 52,718,759 (-)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef352,790,354 - 52,801,626 (-)NCBIHuRef
CHM1_1352,680,576 - 52,692,270 (-)NCBICHM1_1
T2T-CHM13v2.0352,727,397 - 52,738,983 (-)NCBIT2T-CHM13v2.0
Glt8d1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,198,152 - 6,213,671 (+)NCBIGRCr8
mRatBN7.2166,192,269 - 6,207,227 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,192,300 - 6,207,229 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,204,136 - 6,219,074 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,349,598 - 7,364,538 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,211,305 - 6,226,236 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,082,450 - 7,097,405 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,082,450 - 7,097,401 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,011,033 - 7,025,989 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,429,357 - 6,444,262 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,429,354 - 6,444,259 (+)NCBI
Celera168,982,084 - 8,997,063 (-)NCBICelera
Cytogenetic Map16p16NCBI
Glt8d1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,678,166 - 2,690,555 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554302,678,166 - 2,690,555 (-)NCBIChiLan1.0ChiLan1.0
GLT8D1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2252,688,109 - 52,699,781 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1352,692,875 - 52,704,528 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0352,634,996 - 52,646,702 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,862,812 - 53,873,900 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,862,812 - 53,873,900 (-)Ensemblpanpan1.1panPan2
GLT8D1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,093,826 - 37,103,213 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,093,653 - 37,103,211 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,075,552 - 37,085,237 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02037,444,317 - 37,454,006 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,447,602 - 37,454,004 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12036,807,880 - 36,817,553 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,216,508 - 37,226,173 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02037,493,970 - 37,503,657 (+)NCBIUU_Cfam_GSD_1.0
Glt8d1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,345,374 - 170,357,203 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,483,948 - 3,495,773 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,483,948 - 3,495,611 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GLT8D1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,828,604 - 34,839,794 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,828,601 - 34,839,854 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21338,028,635 - 38,039,461 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GLT8D1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12214,068,377 - 14,078,064 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2214,068,718 - 14,077,775 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041152,822,225 - 152,831,715 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Glt8d1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,506,395 - 4,521,704 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248224,506,275 - 4,520,151 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Glt8d1
222 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:470
Count of miRNA genes:173
Interacting mature miRNAs:194
Transcripts:ENSMUST00000022476, ENSMUST00000168584
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse

Markers in Region
AI450005  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381431,011,513 - 31,011,712UniSTSGRCm38
MGSCv371431,824,699 - 31,824,898UniSTSGRCm37
Celera1427,269,330 - 27,269,529UniSTS
Cytogenetic Map14BUniSTS
Whitehead/MRC_RH14232.87UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
UniSTS:235486  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381431,000,727 - 31,001,308UniSTSGRCm38
MGSCv371431,813,913 - 31,814,494UniSTSGRCm37
Celera1427,258,542 - 27,259,123UniSTS
Cytogenetic Map14BUniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001165930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC069873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ177766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX209391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000022476   ⟹   ENSMUSP00000022476
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,723,407 - 30,733,948 (+)Ensembl
GRCm38.p6 Ensembl1431,001,450 - 31,011,991 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168584   ⟹   ENSMUSP00000129323
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,723,357 - 30,733,947 (+)Ensembl
GRCm38.p6 Ensembl1431,001,400 - 31,011,990 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,728,590 - 30,732,987 (+)Ensembl
GRCm38.p6 Ensembl1431,006,633 - 31,011,030 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,723,633 - 30,733,948 (+)Ensembl
GRCm38.p6 Ensembl1431,001,676 - 31,011,991 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226378   ⟹   ENSMUSP00000154591
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,723,361 - 30,730,648 (+)Ensembl
GRCm38.p6 Ensembl1431,001,404 - 31,008,691 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226959
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,733,265 - 30,733,948 (+)Ensembl
GRCm38.p6 Ensembl1431,011,308 - 31,011,991 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227783
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,732,289 - 30,733,948 (+)Ensembl
GRCm38.p6 Ensembl1431,010,332 - 31,011,991 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228255
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,728,416 - 30,733,944 (+)Ensembl
GRCm38.p6 Ensembl1431,006,459 - 31,011,987 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,723,418 - 30,732,754 (+)Ensembl
GRCm38.p6 Ensembl1431,001,461 - 31,010,797 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,728,473 - 30,730,881 (+)Ensembl
GRCm38.p6 Ensembl1431,006,516 - 31,008,924 (+)Ensembl
RefSeq Acc Id: NM_001165930   ⟹   NP_001159402
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
GRCm381431,001,393 - 31,012,441 (+)NCBI
MGSCv371431,814,579 - 31,825,627 (+)RGD
Celera1427,259,208 - 27,270,258 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001403298   ⟹   NP_001390227
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403299   ⟹   NP_001390228
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403300   ⟹   NP_001390229
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403301   ⟹   NP_001390230
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403305   ⟹   NP_001390234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403306   ⟹   NP_001390235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403308   ⟹   NP_001390237
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,810 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403310   ⟹   NP_001390239
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,810 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403336   ⟹   NP_001390265
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403337   ⟹   NP_001390266
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403338   ⟹   NP_001390267
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403339   ⟹   NP_001390268
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403340   ⟹   NP_001390269
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403341   ⟹   NP_001390270
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403342   ⟹   NP_001390271
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,350 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403343   ⟹   NP_001390272
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403344   ⟹   NP_001390273
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_001403345   ⟹   NP_001390274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
RefSeq Acc Id: NM_029626   ⟹   NP_083902
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,613 - 30,733,948 (+)NCBI
GRCm381431,001,433 - 31,012,441 (+)NCBI
MGSCv371431,814,579 - 31,825,627 (+)RGD
Celera1427,259,208 - 27,270,258 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036158894   ⟹   XP_036014787
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391430,723,137 - 30,733,948 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001159402 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390227 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390228 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390229 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390230 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390234 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390235 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390237 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390239 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390265 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390266 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390267 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390268 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390269 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390270 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390271 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390272 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390273 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390274 (Get FASTA)   NCBI Sequence Viewer  
  NP_083902 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014787 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH55709 (Get FASTA)   NCBI Sequence Viewer  
  AAH58731 (Get FASTA)   NCBI Sequence Viewer  
  AAH69873 (Get FASTA)   NCBI Sequence Viewer  
  BAB26903 (Get FASTA)   NCBI Sequence Viewer  
  BAE35802 (Get FASTA)   NCBI Sequence Viewer  
  EDL24782 (Get FASTA)   NCBI Sequence Viewer  
  EDL24783 (Get FASTA)   NCBI Sequence Viewer  
  EDL24784 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000022476
  ENSMUSP00000022476.8
  ENSMUSP00000129323
  ENSMUSP00000129323.2
  ENSMUSP00000154591.2
GenBank Protein Q6NSU3 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_083902   ⟸   NM_029626
- Peptide Label: isoform 1
- UniProtKB: Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot),   Q6NSU3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001159402   ⟸   NM_001165930
- Peptide Label: isoform 1
- UniProtKB: Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot),   Q6NSU3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000022476   ⟸   ENSMUST00000022476
RefSeq Acc Id: ENSMUSP00000129323   ⟸   ENSMUST00000168584
RefSeq Acc Id: ENSMUSP00000154591   ⟸   ENSMUST00000226378
RefSeq Acc Id: XP_036014787   ⟸   XM_036158894
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001390229   ⟸   NM_001403300
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390230   ⟸   NM_001403301
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390267   ⟸   NM_001403338
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390228   ⟸   NM_001403299
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390265   ⟸   NM_001403336
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390270   ⟸   NM_001403341
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390227   ⟸   NM_001403298
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390266   ⟸   NM_001403337
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390271   ⟸   NM_001403342
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390235   ⟸   NM_001403306
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390273   ⟸   NM_001403344
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390234   ⟸   NM_001403305
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390268   ⟸   NM_001403339
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390274   ⟸   NM_001403345
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390269   ⟸   NM_001403340
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390272   ⟸   NM_001403343
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390239   ⟸   NM_001403310
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390237   ⟸   NM_001403308
- Peptide Label: isoform 1
- UniProtKB: Q6NSU3 (UniProtKB/Swiss-Prot),   Q3TV18 (UniProtKB/Swiss-Prot),   Q9CWT8 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NSU3-F1-model_v2 AlphaFold Q6NSU3 1-371 view protein structure

Promoters
RGD ID:8681796
Promoter ID:EPDNEW_M18929
Type:initiation region
Name:Glt8d1_1
Description:Mus musculus glycosyltransferase 8 domain containing 1 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381431,001,401 - 31,001,461EPDNEW
RGD ID:6824955
Promoter ID:MM_KWN:16079
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_001165930,   NM_029626,   UC007SWG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361431,813,886 - 31,815,162 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1923735 AgrOrtholog
Ensembl Genes ENSMUSG00000021916 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000022476 ENTREZGENE
  ENSMUST00000022476.9 UniProtKB/Swiss-Prot
  ENSMUST00000168584 ENTREZGENE
  ENSMUST00000168584.9 UniProtKB/Swiss-Prot
  ENSMUST00000226378.2 UniProtKB/TrEMBL
  ENSMUST00000228255 ENTREZGENE
InterPro Glyco_trans_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:76485 UniProtKB/Swiss-Prot
MGD MGI:1923735 ENTREZGENE
NCBI Gene 76485 ENTREZGENE
PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_transf_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Glt8d1 PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2I3BRI4_MOUSE UniProtKB/TrEMBL
  GL8D1_MOUSE UniProtKB/Swiss-Prot
  Q3TV18 ENTREZGENE
  Q6NSU3 ENTREZGENE
  Q7TNU1_MOUSE UniProtKB/TrEMBL
  Q9CWT8 ENTREZGENE
UniProt Secondary Q3TV18 UniProtKB/Swiss-Prot
  Q9CWT8 UniProtKB/Swiss-Prot