Rassf1 (Ras association domain family member 1)

Gene: Rassf1 (Ras association domain family member 1) Ictidomys tridecemlineatus

Analyze

Symbol:

Rassf1

Name:

Ras association domain family member 1

RGD ID:

12618826

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein ubiquitination (ortholog); protein stabilization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bladder disease (ortholog); FOUND IN cytoskeleton (inferred); microtubule (inferred); microtubule cytoskeleton (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Ras association domain family member 1, transcript variant X1; Ras association domain family member 1, transcript variant X2; Ras association domain family member 1, transcript variant X3; ras association domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	65,096,680 - 65,105,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	1,857,145 - 1,867,260 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	1,857,177 - 1,866,198 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenocarcinoma (ISO)

Animal Mammary Neoplasms (ISO)

bladder disease (ISO)

breast cancer (ISO)

cervical cancer (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

endometrial carcinoma (ISO)

hypertrophic cardiomyopathy (ISO)

inflammatory bowel disease (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

medulloblastoma (ISO)

Mesothelioma (ISO)

Micronuclei, Chromosome-Defective (ISO)

ovarian cancer (ISO)

primary ciliary dyskinesia (ISO)

prostate cancer (ISO)

renal cell carcinoma (ISO)

schistosomiasis (ISO)

transitional cell carcinoma (ISO)

urinary bladder cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA damage response (ISO)

positive regulation of protein ubiquitination (ISO)

protein stabilization (ISO)

Ras protein signal transduction (IEA)

regulation of cell cycle (ISO)

regulation of cell cycle G1/S phase transition (ISO)

signal transduction (IEA)

Cellular Component

cytoskeleton (IEA)

microtubule (IEA)

microtubule cytoskeleton (IEA)

nucleus (IEA)

Molecular Function

identical protein binding (ISO)

metal ion binding (IEA)

protein binding (ISO)

small GTPase binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

p53 signaling pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Rassf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	65,096,680 - 65,105,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	1,857,145 - 1,867,260 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	1,857,177 - 1,866,198 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RASSF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	50,329,788 - 50,340,836 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	50,329,782 - 50,340,980 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	50,367,219 - 50,378,267 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	50,342,221 - 50,353,371 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	50,342,220 - 50,353,371	NCBI
Celera	3	50,340,051 - 50,351,201 (-)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	50,422,848 - 50,433,998 (-)	NCBI		HuRef
CHM1_1	3	50,319,475 - 50,330,627 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	50,359,511 - 50,370,560 (-)	NCBI		T2T-CHM13v2.0

Rassf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	107,428,752 - 107,439,460 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	107,428,754 - 107,439,466 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	107,551,434 - 107,562,267 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	107,551,555 - 107,562,267 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	107,456,987 - 107,464,591 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	107,412,757 - 107,420,361 (+)	NCBI		MGSCv36	mm8
Celera	9	107,163,421 - 107,171,009 (+)	NCBI		Celera
Cytogenetic Map	9	F1	NCBI
cM Map	9	58.12	NCBI

Rassf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	117,103,665 - 117,114,805 (+)	NCBI		GRCr8
mRatBN7.2	8	108,225,023 - 108,236,164 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	108,225,023 - 108,236,164 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	113,852,061 - 113,863,191 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	112,051,217 - 112,062,347 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	109,893,998 - 109,905,128 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	116,307,149 - 116,318,289 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	116,307,141 - 116,318,289 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	115,663,409 - 115,674,549 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	112,798,863 - 112,810,004 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	112,822,246 - 112,829,459 (+)	NCBI
Celera	8	107,531,445 - 107,542,731 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Rassf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955532	2,132,822 - 2,142,106 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955532	2,132,892 - 2,142,106 (-)	NCBI	ChiLan1.0	ChiLan1.0

RASSF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	50,310,363 - 50,321,411 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	50,315,138 - 50,326,157 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	50,255,897 - 50,267,042 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	51,491,548 - 51,502,386 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	51,491,548 - 51,502,392 (-)	Ensembl	panpan1.1		panPan2

RASSF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	39,014,639 - 39,023,393 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	39,014,666 - 39,022,585 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	38,935,865 - 38,944,610 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	39,370,859 - 39,379,601 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	39,370,874 - 39,379,600 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	38,738,691 - 38,747,434 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	39,142,254 - 39,150,992 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	39,422,263 - 39,431,009 (+)	NCBI		UU_Cfam_GSD_1.0

RASSF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	32,816,156 - 32,825,226 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	32,816,156 - 32,825,486 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	35,994,689 - 36,003,831 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RASSF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	11,716,969 - 11,728,646 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	11,716,918 - 11,725,027 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	155,258,161 - 155,269,986 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rassf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	4,181,462 - 4,190,431 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	4,181,207 - 4,190,603 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005326956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005326959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269751	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000025658 ⟹ ENSSTOP00000016624

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936529	1,857,145 - 1,867,260 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000033814 ⟹ ENSSTOP00000032591

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936529	1,857,145 - 1,864,165 (-)	Ensembl

RefSeq Acc Id:

XM_005326956 ⟹ XP_005327013

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,096,680 - 65,105,748 (-)	NCBI
SpeTri2.0	NW_004936529	1,857,177 - 1,866,198 (-)	NCBI

Sequence:

show sequence

TCCTGGGGGCGGTGCCGAAGTCGAGGCCCGCCCTGCGGCCCCTCCCGCCCCGCTCTAGCTAGCG
CCCAGAGCCGGCTGAAACCTGGGTCCGACTGGGCCATGTCGGCGAAGCCAGAGCTCATTGAGCT
GCAAGAGCTCGCATCCTCTGGGCGCATCAGCCCAGGCCGCACCCGCCTGGAGCGTGCCAATGCG
CTGCGCATCTCGCCCGGCACTACGCGCAACCCAGCACAGGTCCTGGGCCGTGGCCACCGCTTCC
AGCCCGCAGGGCCCGCCACGCACACGTGGTGCGACCTCTGCGGCGACTTCATCTGGGGCGTCGT
GCGCAAGGGCCTCCAGTGCGCGTACTGCAAGTTCACCTGCCATTACCGCTGCCGCGCTCTCGTC
TGCTTGGACTGCTGCGGACCCCGGGACCTGGGCTGGGACCCCGCGCTAGAACGTGACACTAACG
TGGATGATCCTGTGGAATGGAAGATACCTAATCTTTCTCAGGCTGAGATTGAGCAGAAGATCAA
GGAGTACAATGGGCAGATCAACAGCAACCTCTTCATGAGCCTGAACAAGGATGGCTCCTACACA
GGCTTCATCAAGGTTCAGCTGAAGCTGGTCCGCCCTGTCTCAGTGCCCTCCAACAAGAAACCGA
CCTCCTTACAGGATGCCCGGAAGGGCCCAGGGCGGGGTACAGCTGTGAGGCGACGGACTTCCTT
TTACCTACCCAAGGATGCTGTCAAACACCTGCATGTGCTGTCACGCACACGGGCACACGAGGTT
ATTGAAGCCCTGCTGCGCAAGTTCTTGGTGGTGGATGATCCTCGCAAGTTTGCACTCTTTGAAC
GAGCTGAGCGTCATGGCCAAGTGTACTTGCGGAAACTGTCAGATGATGAGCAACCCCTGCGTCT
ACGACTCCTTGCAGGACCTAGTGAGAAGACCCTGAGCTTCATCCTAAAGGAGAATGACTCTGGG
GAGGTGAATTGGGATGCTTTCAGCATGCCTGAACTACACAACTTCCTACGCATCCTGCAGCGAG
AGGAAGAAGAACACCTCCGCCAGATCCTGCAGAAGTACTCCCATTGCCGCCAGAAGATCCAAGA
AGCCCTGCATGCCTGCCCCCTGGGGTGACCTCTCCTACCTCTGGGTGGCAGGAGGAGAGTAGGC
AGTGCCAAGAGCGTGCCGTGTGAGTGTGATAGGGCCCATGGGGCCTGAGGAATGAGTGTGCGTG
GAAGCCCTCCCCCATTGGGGGAATGAGCCCAGAGAACAGCGAAGAAGCTGGCCCCCTGCATCCA
CCAGTGGGTGAAGCAGAGTATGTCTTTGCATCTCTTTGCCTTTCGTGTACTGGGTCATGGTGAG
CCAGGACTTCCCTGGGGAGCTGCTCCAGGCTTGCAGCAAGGGTGGAGCAGAAAGAATCTCTTTA
ATTCATGTCTCAGATGTGATAATCTTGGAGACCCTACAAACAGAACAGGATCAGTTTGCAGGGT
TGAGGACCCTCAACCTTGGGGAAGGTTGTGTTTTGGGTCTTGAATAGAGTTTCTGGATAACCCT
ATCAGAGCCATGGGTGGGTGCTCAGAATAAGGCAGGCATCAAGATAGAGTCTAGGTTTCCTTCT
AGTGCCTTCTGACTCCTCATACACTCTGAGGTCAGGGAGTGCTGGTATACAGTACAGCCACAGT
GCCTCAGTACCTCCTCCAAAGAGGATATCCCTGGGTCAGTCTAGGGTCTGTGAATGTGGGCACT
CTGCCAGCCCCATTCCTTGTTTGCCAGGCAAAGCCAGGGTCTGTCTCAGATATTTTTGATGAAG
TGTGTGAATGTATGTAGTGTTTTGTGGCCTCAAATGAATGCCTCCTGTGGGAAAAGGGATGGGG
GTGACAGTCATCATCAGGGCCTGAGGCCTGAGAGAATTGGCTGAATAAAGATTTTAAGAATCCT
G

hide sequence

RefSeq Acc Id:

XM_005326959 ⟹ XP_005327016

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,096,680 - 65,103,483 (-)	NCBI
SpeTri2.0	NW_004936529	1,857,177 - 1,864,019 (-)	NCBI

Sequence:

show sequence

AGACGCGCGGACTGGCAGGCCACAGCGCAGACGTTCGCGGACAGCACAGGCACTGGGCTCAGTA
ATAGTTCTAATAGCCGGTTTTCCGGCAGCACAACTCTAATTTGGCGCGTAGGTTTGGCGGACTG
CCCAAGGATGCCACTGAGGCAGTTCCGAACCAGGCGCATGCGCACTTCCACAACTACGTCCAGT
CCTGAGGCGGCGTCCCTGCACATGCGCACACGCTGCAACACATTCCCCCTGGGAGGTGGGGCCT
GGAGGTGGGTTAAGCTGCTTGGGCAATGAGGTCATTCCTGGAGGCTCAGCTCGTCTGTCCCCGC
CCCCCAGAGTTCCTCCCCCAATGAGACAAGAACTAGATCCTGGCTGTCTACGTTTCAGTCTTAA
CGGTTGCGGTGTTGCGCTGGCCCCAGCGCAAGCGCACACTGATACGAACGCACACGCGCCGGGG
CGGTGGTTGGAGGCTACCGACTCGTAGAACTAGGGGACCAAGCGGGCGCGGCGATGAGTGAGGC
AGAAACGCCTTCTTTCGAGATGACCTGGAGCAGCACGACAAGCAGTGGCTACTGCAGCCAGGAG
GACTCGGACTCGGAGCTCGAGCAGTACTTCACGGCGCGCACCTCTCTGGTCCGCAGGCCGCGCC
GGGACCAGGATGATCCTGTGGAATGGAAGATACCTAATCTTTCTCAGGCTGAGATTGAGCAGAA
GATCAAGGAGTACAATGGGCAGATCAACAGCAACCTCTTCATGAGCCTGAACAAGGATGGCTCC
TACACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTCCGCCCTGTCTCAGTGCCCTCCAACAAGA
AACCGACCTCCTTACAGGATGCCCGGAAGGGCCCAGGGCGGGGTACAGCTGTGAGGCGACGGAC
TTCCTTTTACCTACCCAAGGATGCTGTCAAACACCTGCATGTGCTGTCACGCACACGGGCACAC
GAGGTTATTGAAGCCCTGCTGCGCAAGTTCTTGGTGGTGGATGATCCTCGCAAGTTTGCACTCT
TTGAACGAGCTGAGCGTCATGGCCAAGTGTACTTGCGGAAACTGTCAGATGATGAGCAACCCCT
GCGTCTACGACTCCTTGCAGGACCTAGTGAGAAGACCCTGAGCTTCATCCTAAAGGAGAATGAC
TCTGGGGAGGTGAATTGGGATGCTTTCAGCATGCCTGAACTACACAACTTCCTACGCATCCTGC
AGCGAGAGGAAGAAGAACACCTCCGCCAGATCCTGCAGAAGTACTCCCATTGCCGCCAGAAGAT
CCAAGAAGCCCTGCATGCCTGCCCCCTGGGGTGACCTCTCCTACCTCTGGGTGGCAGGAGGAGA
GTAGGCAGTGCCAAGAGCGTGCCGTGTGAGTGTGATAGGGCCCATGGGGCCTGAGGAATGAGTG
TGCGTGGAAGCCCTCCCCCATTGGGGGAATGAGCCCAGAGAACAGCGAAGAAGCTGGCCCCCTG
CATCCACCAGTGGGTGAAGCAGAGTATGTCTTTGCATCTCTTTGCCTTTCGTGTACTGGGTCAT
GGTGAGCCAGGACTTCCCTGGGGAGCTGCTCCAGGCTTGCAGCAAGGGTGGAGCAGAAAGAATC
TCTTTAATTCATGTCTCAGATGTGATAATCTTGGAGACCCTACAAACAGAACAGGATCAGTTTG
CAGGGTTGAGGACCCTCAACCTTGGGGAAGGTTGTGTTTTGGGTCTTGAATAGAGTTTCTGGAT
AACCCTATCAGAGCCATGGGTGGGTGCTCAGAATAAGGCAGGCATCAAGATAGAGTCTAGGTTT
CCTTCTAGTGCCTTCTGACTCCTCATACACTCTGAGGTCAGGGAGTGCTGGTATACAGTACAGC
CACAGTGCCTCAGTACCTCCTCCAAAGAGGATATCCCTGGGTCAGTCTAGGGTCTGTGAATGTG
GGCACTCTGCCAGCCCCATTCCTTGTTTGCCAGGCAAAGCCAGGGTCTGTCTCAGATATTTTTG
ATGAAGTGTGTGAATGTATGTAGTGTTTTGTGGCCTCAAATGAATGCCTCCTGTGGGAAAAGGG
ATGGGGGTGACAGTCATCATCAGGGCCTGAGGCCTGAGAGAATTGGCTGAATAAAGATTTTAAG
AATCCTG

hide sequence

RefSeq Acc Id:

XM_040269750 ⟹ XP_040125684

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,096,680 - 65,105,871 (-)	NCBI

RefSeq Acc Id:

XM_040269751 ⟹ XP_040125685

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,097,638 - 65,105,871 (-)	NCBI

RefSeq Acc Id:

XM_040269752 ⟹ XP_040125686

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,096,680 - 65,103,679 (-)	NCBI

RefSeq Acc Id:

XM_040269753 ⟹ XP_040125687

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	65,096,680 - 65,102,940 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005327013	(Get FASTA)	NCBI Sequence Viewer
	XP_005327016	(Get FASTA)	NCBI Sequence Viewer
	XP_040125684	(Get FASTA)	NCBI Sequence Viewer
	XP_040125685	(Get FASTA)	NCBI Sequence Viewer
	XP_040125686	(Get FASTA)	NCBI Sequence Viewer
	XP_040125687	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000016624.2
	ENSSTOP00000032591.1
GenBank Protein	KAG3270534	(Get FASTA)	NCBI Sequence Viewer
	KAG3270535	(Get FASTA)	NCBI Sequence Viewer
	KAG3270536	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005327013 ⟸ XM_005326956
- Peptide Label:	isoform X2
- UniProtKB:	I3MWX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAKPELIELQELASSGRISPGRTRLERANALRISPGTTRNPAQVLGRGHRFQPAGPATHTWCD LCGDFIWGVVRKGLQCAYCKFTCHYRCRALVCLDCCGPRDLGWDPALERDTNVDDPVEWKIPNL SQAEIEQKIKEYNGQINSNLFMSLNKDGSYTGFIKVQLKLVRPVSVPSNKKPTSLQDARKGPGR GTAVRRRTSFYLPKDAVKHLHVLSRTRAHEVIEALLRKFLVVDDPRKFALFERAERHGQVYLRK LSDDEQPLRLRLLAGPSEKTLSFILKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQK YSHCRQKIQEALHACPLG hide sequence

RefSeq Acc Id:	XP_005327016 ⟸ XM_005326959
- Peptide Label:	isoform X4
- UniProtKB:	A0A287DG99 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEAETPSFEMTWSSTTSSGYCSQEDSDSELEQYFTARTSLVRRPRRDQDDPVEWKIPNLSQAE IEQKIKEYNGQINSNLFMSLNKDGSYTGFIKVQLKLVRPVSVPSNKKPTSLQDARKGPGRGTAV RRRTSFYLPKDAVKHLHVLSRTRAHEVIEALLRKFLVVDDPRKFALFERAERHGQVYLRKLSDD EQPLRLRLLAGPSEKTLSFILKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSHC RQKIQEALHACPLG hide sequence

RefSeq Acc Id:	XP_040125684 ⟸ XM_040269750
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040125686 ⟸ XM_040269752
- Peptide Label:	isoform X4
- UniProtKB:	A0A287DG99 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040125687 ⟸ XM_040269753
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_040125685 ⟸ XM_040269751
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSSTOP00000032591 ⟸ ENSSTOT00000033814

RefSeq Acc Id:

ENSSTOP00000016624 ⟸ ENSSTOT00000025658

Protein Domains

Phorbol-ester/DAG-type Ras-associating SARAH

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000024829	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000025658.2	UniProtKB/TrEMBL
	ENSSTOT00000033814.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.110	UniProtKB/TrEMBL
	3.30.60.20	UniProtKB/TrEMBL
InterPro	C-RASSF	UniProtKB/TrEMBL
	C1-like_sf	UniProtKB/TrEMBL
	PE/DAG-bd	UniProtKB/TrEMBL
	RA_dom	UniProtKB/TrEMBL
	RASSF1	UniProtKB/TrEMBL
	SARAH_dom	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
NCBI Gene	Rassf1	ENTREZGENE
PANTHER	PTHR22738	UniProtKB/TrEMBL
	PTHR22738:SF12	UniProtKB/TrEMBL
Pfam	C1_1	UniProtKB/TrEMBL
	Nore1-SARAH	UniProtKB/TrEMBL
	PF00788	UniProtKB/TrEMBL
PROSITE	PS50200	UniProtKB/TrEMBL
	SARAH	UniProtKB/TrEMBL
	ZF_DAG_PE_1	UniProtKB/TrEMBL
	ZF_DAG_PE_2	UniProtKB/TrEMBL
SMART	SM00109	UniProtKB/TrEMBL
	SM00314	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54236	UniProtKB/TrEMBL
	SSF57889	UniProtKB/TrEMBL
UniProt	A0A287DG99	ENTREZGENE, UniProtKB/TrEMBL
	I3MWX9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)