GGCX (gamma-glutamyl carboxylase)

Gene: GGCX (gamma-glutamyl carboxylase) Canis lupus familiaris

Analyze

Symbol:

GGCX

Name:

gamma-glutamyl carboxylase

RGD ID:

12131121

Description:

ENCODES a protein that exhibits gamma-glutamyl carboxylase activity (ortholog); vitamin binding (ortholog); INVOLVED IN lung growth (ortholog); peptidyl-glutamic acid carboxylation (ortholog); response to dexamethasone (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); Coagulation Protein Disorders (ortholog); combined deficiency of vitamin K-dependent clotting factors 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

vitamin K-dependent gamma-carboxylase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GGCX (gamma-glutamyl carboxylase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ggcx (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ggcx (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ggcx (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GGCX (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ggcx (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GGCX (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GGCX (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ggcx (gamma-glutamyl carboxylase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	39,512,293 - 39,525,251 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	39,512,387 - 39,529,121 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	39,183,664 - 39,196,637 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	40,258,976 - 40,271,953 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	40,259,006 - 40,275,813 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	39,388,607 - 39,401,574 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	39,460,505 - 39,473,477 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	39,860,352 - 39,873,319 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

blood coagulation disease (ISO)

Coagulation Protein Disorders (ISO)

combined deficiency of vitamin K-dependent clotting factors 1 (ISO)

coronary artery disease (ISO)

genetic disease (ISO)

hemorrhagic disease (ISO)

hereditary spastic paraplegia 31 (ISO)

Inherited Blood Coagulation Disease (ISO)

Pseudoxanthoma Elasticum-Like Disorder with Multiple Coagulation Factor Deficiency (ISO)

thrombocytopenia (ISO)

urolithiasis (ISO)

vitamin K deficiency bleeding (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

lung growth (ISO)

peptidyl-glutamic acid carboxylation (ISO)

response to dexamethasone (ISO)

response to manganese ion (ISO)

response to oxygen levels (ISO)

response to parathyroid hormone (ISO)

response to Thyroglobulin triiodothyronine (ISO)

response to vitamin D (ISO)

response to vitamin K (ISO)

vitamin K metabolic process (IEA)

Cellular Component

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA,ISO)

membrane (IEA)

Molecular Function

gamma-glutamyl carboxylase activity (IEA,ISO)

vitamin binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

acenocoumarol pharmacodynamics pathway (ISO)

alteplase pharmacodynamics pathway (ISO)

aminocaproic acid pharmacodynamics pathway (ISO)

anistreplase pharmacodynamics pathway (ISO)

aprotinin pharmacodynamics pathway (ISO)

argatroban pharmacodynamics pathway (ISO)

bivalirudin pharmacodynamics pathway (ISO)

dicoumarol pharmacodynamics pathway (ISO)

enoxaparin pharmacodynamics pathway (ISO)

fondaparinux pharmacodynamics pathway (ISO)

heparin pharmacodynamics pathway (ISO)

phenindione pharmacodynamics pathway (ISO)

reteplase pharmacodynamics pathway (ISO)

tranexamic acid pharmacodynamics pathway (ISO)

vitamin K cycle pathway (ISO)

vitamin K metabolic pathway (ISO)

warfarin pharmacodynamics pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GGCX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	39,512,293 - 39,525,251 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	39,512,387 - 39,529,121 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	39,183,664 - 39,196,637 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	40,258,976 - 40,271,953 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	40,259,006 - 40,275,813 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	39,388,607 - 39,401,574 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	39,460,505 - 39,473,477 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	39,860,352 - 39,873,319 (+)	NCBI		UU_Cfam_GSD_1.0

GGCX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	85,544,720 - 85,561,493 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	85,544,720 - 85,561,532 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	85,771,843 - 85,788,616 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	85,629,714 - 85,642,090 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	85,687,861 - 85,700,237	NCBI
Celera	2	85,604,381 - 85,616,845 (-)	NCBI		Celera
Cytogenetic Map	2	p11.2	NCBI
HuRef	2	85,669,320 - 85,686,004 (-)	NCBI		HuRef
CHM1_1	2	85,701,785 - 85,718,463 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	85,546,779 - 85,563,552 (-)	NCBI		T2T-CHM13v2.0

Ggcx
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	72,391,262 - 72,407,696 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	72,391,291 - 72,407,695 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	72,414,279 - 72,433,359 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	72,414,308 - 72,430,712 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	72,364,327 - 72,380,701 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	72,343,842 - 72,360,216 (+)	NCBI		MGSCv36	mm8
Celera	6	74,509,409 - 74,525,757 (+)	NCBI		Celera
Cytogenetic Map	6	C1	NCBI
cM Map	6	32.27	NCBI

Ggcx
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	106,027,918 - 106,043,653 (+)	NCBI		GRCr8
mRatBN7.2	4	104,469,737 - 104,485,631 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	104,469,765 - 104,487,063 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	109,849,413 - 109,865,120 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	105,624,526 - 105,640,233 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	104,237,548 - 104,253,262 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	100,277,345 - 100,293,097 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	100,277,391 - 100,293,250 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	165,047,672 - 165,063,604 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	105,719,323 - 105,735,037 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	105,963,803 - 105,979,517 (+)	NCBI
Celera	4	93,622,596 - 93,638,331 (+)	NCBI		Celera
Cytogenetic Map	4	q32	NCBI

Ggcx
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	1,936,772 - 1,952,635 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	1,926,924 - 1,952,635 (+)	NCBI	ChiLan1.0	ChiLan1.0

GGCX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	40,819,956 - 40,833,578 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	40,822,718 - 40,836,051 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	85,599,227 - 85,612,274 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	87,152,108 - 87,164,567 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	87,152,111 - 87,164,567 (-)	Ensembl	panpan1.1		panPan2

Ggcx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	79,147,378 - 79,158,577 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936712	1,699,750 - 1,709,087 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936712	1,696,264 - 1,709,087 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GGCX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	59,202,429 - 59,218,145 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	59,202,363 - 59,219,807 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	62,263,519 - 62,276,716 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GGCX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	21,593,202 - 21,605,800 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	21,593,088 - 21,604,885 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	90,859,363 - 90,872,520 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ggcx
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	17,579,661 - 17,593,150 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	17,579,690 - 17,595,111 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GGCX
124 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	3		22	6	6	6	6		12		10	6
Low	2	5						6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005630488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014120376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038498992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038498993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038498994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038561579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038561580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038561581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038625620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038625621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038625622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038691541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038691542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038691543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_532979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000012362 ⟹ ENSCAFP00000011457

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	39,512,387 - 39,529,121 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000085156 ⟹ ENSCAFP00000057679

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	39,512,387 - 39,522,823 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000088625 ⟹ ENSCAFP00000048819

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	39,512,387 - 39,522,823 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025480 ⟹ ENSCAFP00845020063

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	40,259,006 - 40,275,813 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025523 ⟹ ENSCAFP00845020093

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	40,259,006 - 40,271,953 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025554 ⟹ ENSCAFP00845020123

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	40,259,076 - 40,271,953 (+)	Ensembl

RefSeq Acc Id:

XM_005630488 ⟹ XP_005630545

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	39,512,350 - 39,522,458 (+)	NCBI
Dog10K_Boxer_Tasha	17	39,183,729 - 39,193,834 (+)	NCBI

Sequence:

show sequence

GGCGCTCGTGCGGTGGCCGTCTTCCCTCCGCGGACCCATGGCGGCGTCGGCCCGGTCCGCGCGG
GGCCCGCCGGACTCACGTAGGCTCAAGAGTCCTCCCGTGCGACGGAGAGAGGGGCGCTGACTCA
AAGGGGCGGGGGCGATAAAGTACAGAAAGACAAGGCTGGACAGTCTAAAGGGCCCAGTCAGGGC
AGCGGAATGGGGAAGCTCTTGGGGTTTGAGTGGACAGATGTTTCCAGCTGGGGAAGACTGGTAA
CTCTGCTGAATCGACCAACGGATCCTGCCAGCCTGGCCGTCTTCCGTTTTCTCTTTGGGCTGAT
GATGGTGTTGGACATTCCCCAAGAGCGGGGACTTAGTTCCCTGGACCGAAGATACCTGGACGGG
CTGGATGTGTGCCGCTTCCCCTTGCTGAATGCCCTGCAACCACTACCACTTGACTGGATGTATC
TTGTCTATACCATCATGTTTCTGGGGGCACTGGGCATGATGCTGGGCCTGTGCTACCGGATAAG
CTGTGTGTTATTCCTGCTGCCATACTGGTATGTGTTTCTCCTGGACAAGACGTCATGGAACAAC
CACTCCTATCTGTATGGTTTGTTGGCCTTTCAGCTGACATTCATGGATGCAAACCACTACTGGT
CTGTGGACGGCCTGCTGAATGCTCGTAAGCGGAATGCCCATGTGCCCCTTTGGAACTATGCCAT
GCTACGTGGCCAGATCTTCATTGTGTACTTCATTGCGGGTGTGAAAAAGCTGGACGCAGACTGG
GTTGAAGGCTATTCTATGGAGTATCTGTCCCGGCACTGGCTCTTCAGTCCCTTCAAACTAGTAT
TGTCTGAGGAGATGACCAGTCTACTAGTGGTACACTGGTGCGGATTGCTGCTTGACCTCTCAGC
TGGTTTCCTGCTCTTTTTTGATGCCTCGAGGTCCATTGGTCTCCTCTTCGTGTCCTACTTCCAC
TGCATGAATTCCCAGCTTTTTAGCATCGGCATGTTCCCCTACGTCATGCTGGCCAGCAGCCCTC
TCTTCTGCTCCCCTGAGTGGCCCCGGAAGCTAGTATCTCGATTCCCCGAAAGGCTGCAGGAGCT
GCTGCCCCTCAAAGCTGCCCCTCAGCCCAGTATGTCCTGCGTGTATAAGAGGAGCCGGGCCAAA
GGTGGCCAGAAGCCAGGGCTGCGCCATCGGCTCAGTGCTGCCTTCACCCTGCTCTACCTCCTGG
AGCAGCTCTTCCTGCCCTATTCCCATTTCCTCACCCAGGGCTATAACAACTGGACAAATGGGCT
GTATGGCTATTCCTGGGACATGATGGTGCACTCGCGCTCCCACCAGCACGTGAAGATCACCTAC
CGGGACGGCCGCACTGGCGAGCTGGGCTACCTTAACCCTGGGGTATTCACGCAGAGCCGGCGAT
GGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCACCTGCTTCCCAAGTA
CAATGTCACTGAGCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAG
AGGATTTTTGACCCTCGTGTGGACATTGTGCAGGCCGCCTGGTCCCCCTTCCAGCGTACACCTT
GGCTGCAGCCACTGTTGATGGACCTGTCTCCCTGGAGGACCAAGTTACAGGAAATCAAGAGTAG
CCTGGACAACCACACAGAGGTGGTCTTCATTGCAGATTTCCCTGGGCTGCACCTGGAGAATTTT
GTGAGTGAAGACCTAGGCAACACTAGTATTCAGCTGCTGCAAGGGGAGGTGACTGTAGAGCTGG
TGGCAGAACAGAAGAATCAGACTCTTCACGAGGGAGAAAAAATGCAGCTGCCTGCTGGAGAGTA
CCATAAGGTGTATACGATATCACCCGGTCCTTCCTGCTACATGTACATCTACGTCAATACTACA
GAGCTTGCACTGGAGCAAGACCTGGCCTATCTGCAAGAATTAAAAGAGAAGGTGGAGAATGGAA
CTGAAACGGGGCCTTTACCTCCAGAGCTGCAGCCTCTGCTGGAAGGAGAAGTGCAAGGGGGCCC
TGAGCCAACACCTCTGGTTCAGACCTTTCTTAGACGCCAGCGAAGGCTCCAAGAGCTTGAACGC
CGGAGAAATACCCCATTCCACGAGCGGCTCTCCCGCTTCTTGCTGCGGAAGCTCTATATCTTTC
GCCGCAGCTTCCTGATGACTTGTATCTCACTTCGAAATCTGGCATTAGGTCGCCCTTCCCTGGA
GCAGCTGGCCCAAGAGGTGACTTATGCAAACTTGCGACCCTTTGAGCCAGTTGGAGAGTCGGGT
CATTCAAACACAGATTCTTCAAATTCTAATCCTTCTGAGCTGAATTCTGACCCTGTCCACTCAG
AGTTCTGA

hide sequence

RefSeq Acc Id:

XM_014120376 ⟹ XP_013975851

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	39,514,816 - 39,525,251 (+)	NCBI
Dog10K_Boxer_Tasha	17	39,186,198 - 39,196,637 (+)	NCBI

Sequence:

show sequence

TGGGCATGATGCTGGGCCTGTGCTACCGGATAAGCTGTGTGTTATTCCTGCTGCCATACTGGTA
TGTGTTTCTCCTGGACAAGACGTCATGGAACAACCACTCCTATCTGTATGGTTTGTTGGCCTTT
CAGCTGACATTCATGGATGCAAACCACTACTGGTGCCCTGATCTATCCACTTCCTGTAACCCAT
TTAGAAGAAGAGAAGACTAAAGCCAGACATAGATGTTTTCAGATACTTCAAGGGTGGTCATGTG
GAAGAGGGAGCAGACTTCCTCTGTGTGAGCCCAGAGGGGCAGAGTTAGAGCCAAGAGTAGAAGT
TGCTGTGAGGCAGAGTCATGTCAGAAGGAGAGGGCCCACCAGGGCTGCTCAGCAGTGCTGTCCT
GGGAGGAGGTCTGTGGACGGCCTGCTGAATGCTCGTAAGCGGAATGCCCATGTGCCCCTTTGGA
ACTATGCCATGCTACGTGGCCAGATCTTCATTGTGTACTTCATTGCGGGTGTGAAAAAGCTGGA
CGCAGACTGGGTTGAAGGCTATTCTATGGAGTATCTGTCCCGGCACTGGCTCTTCAGTCCCTTC
AAACTAGTATTGTCTGAGGAGATGACCAGTCTACTAGTGGTACACTGGTGCGGATTGCTGCTTG
ACCTCTCAGCTGGTTTCCTGCTCTTTTTTGATGCCTCGAGGTCCATTGGTCTCCTCTTCGTGTC
CTACTTCCACTGCATGAATTCCCAGCTTTTTAGCATCGGCATGTTCCCCTACGTCATGCTGGCC
AGCAGCCCTCTCTTCTGCTCCCCTGAGTGGCCCCGGAAGCTAGTATCTCGATTCCCCGAAAGGC
TGCAGGAGCTGCTGCCCCTCAAAGCTGCCCCTCAGCCCAGTATGTCCTGCGTGTATAAGAGGAG
CCGGGCCAAAGGTGGCCAGAAGCCAGGGCTGCGCCATCGGCTCAGTGCTGCCTTCACCCTGCTC
TACCTCCTGGAGCAGCTCTTCCTGCCCTATTCCCATTTCCTCACCCAGGGCTATAACAACTGGA
CAAATGGGCTGTATGGCTATTCCTGGGACATGATGGTGCACTCGCGCTCCCACCAGCACGTGAA
GATCACCTACCGGGACGGCCGCACTGGCGAGCTGGGCTACCTTAACCCTGGGGTATTCACGCAG
AGCCGGCGATGGAAGGATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCACCTGC
TTCCCAAGTACAATGTCACTGAGCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCG
CTTCCAGCAGAGGATTTTTGACCCTCGTGTGGACATTGTGCAGGCCGCCTGGTCCCCCTTCCAG
CGTACACCTTGGCTGCAGCCACTGTTGATGGACCTGTCTCCCTGGAGGACCAAGTTACAGGAAA
TCAAGAGTAGCCTGGACAACCACACAGAGGTGGTCTTCATTGCAGATTTCCCTGGGCTGCACCT
GGAGAATTTTGTGAGTGAAGACCTAGGCAACACTAGTATTCAGCTGCTGCAAGGGGAGGTGACT
GTAGAGCTGGTGGCAGAACAGAAGAATCAGACTCTTCACGAGGGAGAAAAAATGCAGCTGCCTG
CTGGAGAGTACCATAAGGTGTATACGATATCACCCGGTCCTTCCTGCTACATGTACATCTACGT
CAATACTACAGAGCTTGCACTGGAGCAAGACCTGGCCTATCTGCAAGAATTAAAAGAGAAGGTG
GAGAATGGAACTGAAACGGGGCCTTTACCTCCAGAGCTGCAGCCTCTGCTGGAAGGAGAAGTGC
AAGGGGGCCCTGAGCCAACACCTCTGGTTCAGACCTTTCTTAGACGCCAGCGAAGGCTCCAAGA
GCTTGAACGCCGGAGAAATACCCCATTCCACGAGCGGCTCTCCCGCTTCTTGCTGCGGAAGCTC
TATATCTTTCGCCGCAGCTTCCTGATGACTTGTATCTCACTTCGAAATCTGGCATTAGGTCGCC
CTTCCCTGGAGCAGCTGGCCCAAGAGGTGACTTATGCAAACTTGCGACCCTTTGAGCCAGTTGG
AGAGTCGGGTCATTCAAACACAGATTCTTCAAATTCTAATCCTTCTGAGCTGAATTCTGACCCT
GTCCACTCAGAGTTCTGACTGGGGCAGATGTTGGATACAGATGTGGGAGCAACCAGTCATAGGA
CCATTAACCTATGCAGTGGAAATGTGAAGAAATGGTTATTTTAGACATTTTTCCTCCTTGTTTA
TAGTTCTTTTAAATTCAGAGAAGATATCTTAGAGGAGCCAAGGAAGTGAAGCAAGGATAAGATT
TATCACATCAAGGTTGAGGGGTTAGGAGGGGTTTAAAATCAATATGAAAATGCCCTTCTAGGAT
AAGAAGGGGTAAGAGTCAGGTTTAAAGTGACTGGCCCCTTAGCGAAAAAGATTTAATGTACCAT
GATGACAATAGTGCCTGTTCTCAAGTTATTTGTTATATGCTAGACACTGTGTGACGCATTTTGC
CTGTGTTACTGCATTTAGTCCTTACTGGCCATTAGCCCTATTTTACAGTTGGAAGAAGTGAGGC
TCAGAGATAAATTTGCTCAAAGACAACACCTAATAAGAGATGTATTGATGGTTTGAATTTTGTC
TGTTTGACTTAGGGTCGCATACCCTGCCTCTTGCAATTTGCAGAATCACTGACAATAATTATGA
AATAGTGTAGACTAAAATTTGTCTTAGTTACAGGTAAGATTAAGATGGTGATTAAGTTCTGAAT
GCAGAGAGTAATTTTCTCTTCTCTCCTTCATTGTGCTTATTATGGGGACAGCCAGTTTTTCACT
AGCAGCAATGAGAATAGGACAAAGATAAACTAATAAGGAAATTTAGATGATTGGTAGTAGTAGC
TCTCTCAAGCTTAGTGTTAATTTAGCATTATTCTAGCCTTTGGTGAGAAGAAAGTGATAAGTGA
TGATGTAAGAATTAACCAAACTTGGTGATGGATTAGAACATGTTTGAAGTTATTTTGTAGGTTT
GGATGCACAGGGTGTGATTGAGGAAGCACCTCAATTCCTTGGGCATTGGGCTAGCAAGTGAGAA
ATGCATAGAGAAAAAAGGAAAACCCAAAGGCTTCTATTTTGGGTGCTCATGGCCTCATAGCAAA
GACTAGCAGTAAATTGGCAGTCCCAGTAATTTTGATAAAGAATTGCATCTCTTGTTTTCAGGTT
TCTCTTCCCATGCCCCACCCCACGCCCACCTCTTCAGATAGTGGTTCTTTACTAGGCAGCTGCC
TTCTCCCTATACACACTTCAGGATGATTATGCTGCTGCTTAGCTTGCTTCCTTGTGCCATATAC
CTATAGACCTAACTAGCTCCACTTGGGGATCTCACAAAGCTTTCACTCTGTCCTAGACAGAACT
TCTGTTTATCCCCAACTCAGACCTGCATCTCCTTTACTAGTGAATGGCAACTGCATCTTTTTCT
TTTTTCTTTTTTTTGTCATCTGAATCTTCAGCCTTGATTCATCCTTTTTTATCACCTTTCTTAA
ATTCCAAGTTGTATCAATTCTACCTCTTCAATCTATTCATCTCTACTACCTCTGTGTTCTTTCA
GCCTTTATATTGGAATTTAGTTAAAAGGCCAGATCAGATGCAATTGTGCAGGTTGGGCCTGACC
GGATTCCTACAAGGCATTTTGTGGGTTAGCTAGCCAGTAGCTGTGCCACAGGTTGGTAAGAGCA
ATGTGAGGGAAAGTGTTTTTTTAAGTTTTGTTGATCTCAGTGACAATATACTTTGGCACAATGT
CCTTTGCCAGGGAGTTCAGCTCTATTTTGTTCCCCTGCGCTTGACCCCCAACTCTCCCACCCAT
TCATTACTTGACTGGTATGAAAAGTAGTTCATTAGGGAAAGGGACTCCTACCAAACTAGTTTTA
ATATAGGCAAGGATGCTATCCCAAAACCGTTAGTATGCCACCTTTTCTCCAATGAAAGTGTTGG
GGTGAGATGCAGCAGAAAGGTGGTTATCTTGATACATTTAAGAAAAGCTCAAAGGAATAAATGA
GTTCATTTCAGGAGGAATCTGGTCCTGTGCAGCAATTCTAGGAATGGGCTATCAACGTCCTTTT
AGCCAGGCTTTAGTATTCCATTTCATTCTACTCCACTCCCAGCATTTGGATCTTTTATCCCTTG
TCAAGTCATCCCTTCAAAACTTCATAGGTCATATTTCCTTCTAACCCAAACAGTTTAGGTTTAT
TCCATAACGTTGCATACTTTTGATATTCAACCATTTGCAGTCACCATCACCTTGACACCTTGGT
TGCTCTTCTTGGGGCTGGTTACTATTTATTCAACCTTAATTTTTTTGTTACACAGAAGACAGGC
CTTTACAAAGATCCTTCTTAGTTTAGAGCTTCTCAAGGTACGGCATCTTCCTAGCAAATATTGA
ACCTAACCTTAATTTCTCTGGTGCTATCCCACCAGCCAATGGGCAGCCAGCTCATCCTCAATTC
CGTTTGGCCAGCCATGTTGCTATTTGACAGCAACACATTGTTCTCTAAAAAAATTGAGACTTTC
ACTCAAGATTGGTTTGCCTCTTCTCCCAACATAGTTTAAGCCTCCAAATAAGTGTAATCAAGCA
TTGAGTCATTACAGGTCAATTAAAAAGGTTGAACCACCACTTACTTCATACATGCCAGTGTAAA
CATGTGCCAAGTGGCTGCTGTACTTTAGCTCCTAGGCTTAAAAAGGGATGGTTCAAGGTCTTGT
GTAGTAAACCTCTACAAGAATAAAGGCTTTAGAAACGTACAGCATCTTCACTAATTTGATGTTC
AAATTTCCACTTTAACATAAAATGGATGTTTTGTAAGCCCCTTACCACTCTTCAAAAATTTTGC
CAACTGTGTGTCACCTGCCGCCTTTAACATGTGTTTATAATAAAGGGATTAATACTTAA

hide sequence

RefSeq Acc Id:

XM_038498992 ⟹ XP_038354920

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	39,388,607 - 39,401,574 (+)	NCBI

RefSeq Acc Id:

XM_038498993 ⟹ XP_038354921

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	39,388,670 - 39,398,772 (+)	NCBI

RefSeq Acc Id:

XM_038498994 ⟹ XP_038354922

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	39,391,139 - 39,401,574 (+)	NCBI

RefSeq Acc Id:

XM_038561579 ⟹ XP_038417507

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	39,860,352 - 39,873,319 (+)	NCBI

RefSeq Acc Id:

XM_038561580 ⟹ XP_038417508

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	39,860,417 - 39,870,518 (+)	NCBI

RefSeq Acc Id:

XM_038561581 ⟹ XP_038417509

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	39,862,885 - 39,873,319 (+)	NCBI

RefSeq Acc Id:

XM_038625620 ⟹ XP_038481548

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	39,460,505 - 39,473,477 (+)	NCBI

RefSeq Acc Id:

XM_038625621 ⟹ XP_038481549

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	39,460,570 - 39,470,676 (+)	NCBI

RefSeq Acc Id:

XM_038625622 ⟹ XP_038481550

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	39,463,039 - 39,473,477 (+)	NCBI

RefSeq Acc Id:

XM_038691541 ⟹ XP_038547469

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	40,258,976 - 40,271,953 (+)	NCBI

RefSeq Acc Id:

XM_038691542 ⟹ XP_038547470

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	40,259,041 - 40,269,149 (+)	NCBI

RefSeq Acc Id:

XM_038691543 ⟹ XP_038547471

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	40,261,511 - 40,271,953 (+)	NCBI

RefSeq Acc Id:

XM_532979 ⟹ XP_532979

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	39,512,293 - 39,525,251 (+)	NCBI
Dog10K_Boxer_Tasha	17	39,183,664 - 39,196,637 (+)	NCBI

Sequence:

show sequence

GCTTAGGGCAGCGATTCCTCGCGACGCGACGCGACGCGACGCGACGCTCCCTGCTTGGGCGCTC
GTGCGGTGGCCGTCTTCCCTCCGCGGACCCATGGCGGCGTCGGCCCGGTCCGCGCGGGGCCCGC
CGGACTCACATAAAGTACAGAAAGACAAGGCTGGACAGTCTAAAGGGCCCAGTCAGGGCAGCGG
AATGGGGAAGCTCTTGGGGTTTGAGTGGACAGATGTTTCCAGCTGGGGAAGACTGGTAACTCTG
CTGAATCGACCAACGGATCCTGCCAGCCTGGCCGTCTTCCGTTTTCTCTTTGGGCTGATGATGG
TGTTGGACATTCCCCAAGAGCGGGGACTTAGTTCCCTGGACCGAAGATACCTGGACGGGCTGGA
TGTGTGCCGCTTCCCCTTGCTGAATGCCCTGCAACCACTACCACTTGACTGGATGTATCTTGTC
TATACCATCATGTTTCTGGGGGCACTGGGCATGATGCTGGGCCTGTGCTACCGGATAAGCTGTG
TGTTATTCCTGCTGCCATACTGGTATGTGTTTCTCCTGGACAAGACGTCATGGAACAACCACTC
CTATCTGTATGGTTTGTTGGCCTTTCAGCTGACATTCATGGATGCAAACCACTACTGGTCTGTG
GACGGCCTGCTGAATGCTCGTAAGCGGAATGCCCATGTGCCCCTTTGGAACTATGCCATGCTAC
GTGGCCAGATCTTCATTGTGTACTTCATTGCGGGTGTGAAAAAGCTGGACGCAGACTGGGTTGA
AGGCTATTCTATGGAGTATCTGTCCCGGCACTGGCTCTTCAGTCCCTTCAAACTAGTATTGTCT
GAGGAGATGACCAGTCTACTAGTGGTACACTGGTGCGGATTGCTGCTTGACCTCTCAGCTGGTT
TCCTGCTCTTTTTTGATGCCTCGAGGTCCATTGGTCTCCTCTTCGTGTCCTACTTCCACTGCAT
GAATTCCCAGCTTTTTAGCATCGGCATGTTCCCCTACGTCATGCTGGCCAGCAGCCCTCTCTTC
TGCTCCCCTGAGTGGCCCCGGAAGCTAGTATCTCGATTCCCCGAAAGGCTGCAGGAGCTGCTGC
CCCTCAAAGCTGCCCCTCAGCCCAGTATGTCCTGCGTGTATAAGAGGAGCCGGGCCAAAGGTGG
CCAGAAGCCAGGGCTGCGCCATCGGCTCAGTGCTGCCTTCACCCTGCTCTACCTCCTGGAGCAG
CTCTTCCTGCCCTATTCCCATTTCCTCACCCAGGGCTATAACAACTGGACAAATGGGCTGTATG
GCTATTCCTGGGACATGATGGTGCACTCGCGCTCCCACCAGCACGTGAAGATCACCTACCGGGA
CGGCCGCACTGGCGAGCTGGGCTACCTTAACCCTGGGGTATTCACGCAGAGCCGGCGATGGAAG
GATCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCACCTGCTTCCCAAGTACAATG
TCACTGAGCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAGAGGAT
TTTTGACCCTCGTGTGGACATTGTGCAGGCCGCCTGGTCCCCCTTCCAGCGTACACCTTGGCTG
CAGCCACTGTTGATGGACCTGTCTCCCTGGAGGACCAAGTTACAGGAAATCAAGAGTAGCCTGG
ACAACCACACAGAGGTGGTCTTCATTGCAGATTTCCCTGGGCTGCACCTGGAGAATTTTGTGAG
TGAAGACCTAGGCAACACTAGTATTCAGCTGCTGCAAGGGGAGGTGACTGTAGAGCTGGTGGCA
GAACAGAAGAATCAGACTCTTCACGAGGGAGAAAAAATGCAGCTGCCTGCTGGAGAGTACCATA
AGGTGTATACGATATCACCCGGTCCTTCCTGCTACATGTACATCTACGTCAATACTACAGAGCT
TGCACTGGAGCAAGACCTGGCCTATCTGCAAGAATTAAAAGAGAAGGTGGAGAATGGAACTGAA
ACGGGGCCTTTACCTCCAGAGCTGCAGCCTCTGCTGGAAGGAGAAGTGCAAGGGGGCCCTGAGC
CAACACCTCTGGTTCAGACCTTTCTTAGACGCCAGCGAAGGCTCCAAGAGCTTGAACGCCGGAG
AAATACCCCATTCCACGAGCGGCTCTCCCGCTTCTTGCTGCGGAAGCTCTATATCTTTCGCCGC
AGCTTCCTGATGACTTGTATCTCACTTCGAAATCTGGCATTAGGTCGCCCTTCCCTGGAGCAGC
TGGCCCAAGAGGTGACTTATGCAAACTTGCGACCCTTTGAGCCAGTTGGAGAGTCGGGTCATTC
AAACACAGATTCTTCAAATTCTAATCCTTCTGAGCTGAATTCTGACCCTGTCCACTCAGAGTTC
TGACTGGGGCAGATGTTGGATACAGATGTGGGAGCAACCAGTCATAGGACCATTAACCTATGCA
GTGGAAATGTGAAGAAATGGTTATTTTAGACATTTTTCCTCCTTGTTTATAGTTCTTTTAAATT
CAGAGAAGATATCTTAGAGGAGCCAAGGAAGTGAAGCAAGGATAAGATTTATCACATCAAGGTT
GAGGGGTTAGGAGGGGTTTAAAATCAATATGAAAATGCCCTTCTAGGATAAGAAGGGGTAAGAG
TCAGGTTTAAAGTGACTGGCCCCTTAGCGAAAAAGATTTAATGTACCATGATGACAATAGTGCC
TGTTCTCAAGTTATTTGTTATATGCTAGACACTGTGTGACGCATTTTGCCTGTGTTACTGCATT
TAGTCCTTACTGGCCATTAGCCCTATTTTACAGTTGGAAGAAGTGAGGCTCAGAGATAAATTTG
CTCAAAGACAACACCTAATAAGAGATGTATTGATGGTTTGAATTTTGTCTGTTTGACTTAGGGT
CGCATACCCTGCCTCTTGCAATTTGCAGAATCACTGACAATAATTATGAAATAGTGTAGACTAA
AATTTGTCTTAGTTACAGGTAAGATTAAGATGGTGATTAAGTTCTGAATGCAGAGAGTAATTTT
CTCTTCTCTCCTTCATTGTGCTTATTATGGGGACAGCCAGTTTTTCACTAGCAGCAATGAGAAT
AGGACAAAGATAAACTAATAAGGAAATTTAGATGATTGGTAGTAGTAGCTCTCTCAAGCTTAGT
GTTAATTTAGCATTATTCTAGCCTTTGGTGAGAAGAAAGTGATAAGTGATGATGTAAGAATTAA
CCAAACTTGGTGATGGATTAGAACATGTTTGAAGTTATTTTGTAGGTTTGGATGCACAGGGTGT
GATTGAGGAAGCACCTCAATTCCTTGGGCATTGGGCTAGCAAGTGAGAAATGCATAGAGAAAAA
AGGAAAACCCAAAGGCTTCTATTTTGGGTGCTCATGGCCTCATAGCAAAGACTAGCAGTAAATT
GGCAGTCCCAGTAATTTTGATAAAGAATTGCATCTCTTGTTTTCAGGTTTCTCTTCCCATGCCC
CACCCCACGCCCACCTCTTCAGATAGTGGTTCTTTACTAGGCAGCTGCCTTCTCCCTATACACA
CTTCAGGATGATTATGCTGCTGCTTAGCTTGCTTCCTTGTGCCATATACCTATAGACCTAACTA
GCTCCACTTGGGGATCTCACAAAGCTTTCACTCTGTCCTAGACAGAACTTCTGTTTATCCCCAA
CTCAGACCTGCATCTCCTTTACTAGTGAATGGCAACTGCATCTTTTTCTTTTTTCTTTTTTTTG
TCATCTGAATCTTCAGCCTTGATTCATCCTTTTTTATCACCTTTCTTAAATTCCAAGTTGTATC
AATTCTACCTCTTCAATCTATTCATCTCTACTACCTCTGTGTTCTTTCAGCCTTTATATTGGAA
TTTAGTTAAAAGGCCAGATCAGATGCAATTGTGCAGGTTGGGCCTGACCGGATTCCTACAAGGC
ATTTTGTGGGTTAGCTAGCCAGTAGCTGTGCCACAGGTTGGTAAGAGCAATGTGAGGGAAAGTG
TTTTTTTAAGTTTTGTTGATCTCAGTGACAATATACTTTGGCACAATGTCCTTTGCCAGGGAGT
TCAGCTCTATTTTGTTCCCCTGCGCTTGACCCCCAACTCTCCCACCCATTCATTACTTGACTGG
TATGAAAAGTAGTTCATTAGGGAAAGGGACTCCTACCAAACTAGTTTTAATATAGGCAAGGATG
CTATCCCAAAACCGTTAGTATGCCACCTTTTCTCCAATGAAAGTGTTGGGGTGAGATGCAGCAG
AAAGGTGGTTATCTTGATACATTTAAGAAAAGCTCAAAGGAATAAATGAGTTCATTTCAGGAGG
AATCTGGTCCTGTGCAGCAATTCTAGGAATGGGCTATCAACGTCCTTTTAGCCAGGCTTTAGTA
TTCCATTTCATTCTACTCCACTCCCAGCATTTGGATCTTTTATCCCTTGTCAAGTCATCCCTTC
AAAACTTCATAGGTCATATTTCCTTCTAACCCAAACAGTTTAGGTTTATTCCATAACGTTGCAT
ACTTTTGATATTCAACCATTTGCAGTCACCATCACCTTGACACCTTGGTTGCTCTTCTTGGGGC
TGGTTACTATTTATTCAACCTTAATTTTTTTGTTACACAGAAGACAGGCCTTTACAAAGATCCT
TCTTAGTTTAGAGCTTCTCAAGGTACGGCATCTTCCTAGCAAATATTGAACCTAACCTTAATTT
CTCTGGTGCTATCCCACCAGCCAATGGGCAGCCAGCTCATCCTCAATTCCGTTTGGCCAGCCAT
GTTGCTATTTGACAGCAACACATTGTTCTCTAAAAAAATTGAGACTTTCACTCAAGATTGGTTT
GCCTCTTCTCCCAACATAGTTTAAGCCTCCAAATAAGTGTAATCAAGCATTGAGTCATTACAGG
TCAATTAAAAAGGTTGAACCACCACTTACTTCATACATGCCAGTGTAAACATGTGCCAAGTGGC
TGCTGTACTTTAGCTCCTAGGCTTAAAAAGGGATGGTTCAAGGTCTTGTGTAGTAAACCTCTAC
AAGAATAAAGGCTTTAGAAACGTACAGCATCTTCACTAATTTGATGTTCAAATTTCCACTTTAA
CATAAAATGGATGTTTTGTAAGCCCCTTACCACTCTTCAAAAATTTTGCCAACTGTGTGTCACC
TGCCGCCTTTAACATGTGTTTATAATAAAGGGATTAATACTTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005630545	(Get FASTA)	NCBI Sequence Viewer
	XP_013975851	(Get FASTA)	NCBI Sequence Viewer
	XP_038354920	(Get FASTA)	NCBI Sequence Viewer
	XP_038354921	(Get FASTA)	NCBI Sequence Viewer
	XP_038354922	(Get FASTA)	NCBI Sequence Viewer
	XP_038417507	(Get FASTA)	NCBI Sequence Viewer
	XP_038417508	(Get FASTA)	NCBI Sequence Viewer
	XP_038417509	(Get FASTA)	NCBI Sequence Viewer
	XP_038481548	(Get FASTA)	NCBI Sequence Viewer
	XP_038481549	(Get FASTA)	NCBI Sequence Viewer
	XP_038481550	(Get FASTA)	NCBI Sequence Viewer
	XP_038547469	(Get FASTA)	NCBI Sequence Viewer
	XP_038547470	(Get FASTA)	NCBI Sequence Viewer
	XP_038547471	(Get FASTA)	NCBI Sequence Viewer
	XP_532979	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000011457.3
	ENSCAFP00000048819.1
	ENSCAFP00000057679.1
	ENSCAFP00030018063.1
	ENSCAFP00030018189.1
	ENSCAFP00030018263.1
	ENSCAFP00040008344.1
	ENSCAFP00040008377.1
	ENSCAFP00040008429.1
	ENSCAFP00040008491.1
	ENSCAFP00845020063
	ENSCAFP00845020063.1
	ENSCAFP00845020093
	ENSCAFP00845020093.1
	ENSCAFP00845020123.1

RefSeq Acc Id:	XP_532979 ⟸ XM_532979
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KQG7 (UniProtKB/TrEMBL), A0A8C0N2L1 (UniProtKB/TrEMBL), A0A8I3NVM5 (UniProtKB/TrEMBL), A0A8C0Q803 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAASARSARGPPDSHKVQKDKAGQSKGPSQGSGMGKLLGFEWTDVSSWGRLVTLLNRPTDPASL AVFRFLFGLMMVLDIPQERGLSSLDRRYLDGLDVCRFPLLNALQPLPLDWMYLVYTIMFLGALG MMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDANHYWSVDGLLNARKRN AHVPLWNYAMLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWLFSPFKLVLSEEMTSLLVVH WCGLLLDLSAGFLLFFDASRSIGLLFVSYFHCMNSQLFSIGMFPYVMLASSPLFCSPEWPRKLV SRFPERLQELLPLKAAPQPSMSCVYKRSRAKGGQKPGLRHRLSAAFTLLYLLEQLFLPYSHFLT QGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVFTQSRRWKDHADMLKQYA TCLSHLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPFQRTPWLQPLLMDLSPW RTKLQEIKSSLDNHTEVVFIADFPGLHLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLHEG EKMQLPAGEYHKVYTISPGPSCYMYIYVNTTELALEQDLAYLQELKEKVENGTETGPLPPELQP LLEGEVQGGPEPTPLVQTFLRRQRRLQELERRRNTPFHERLSRFLLRKLYIFRRSFLMTCISLR NLALGRPSLEQLAQEVTYANLRPFEPVGESGHSNTDSSNSNPSELNSDPVHSEF hide sequence

RefSeq Acc Id:	XP_005630545 ⟸ XM_005630488
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKLLGFEWTDVSSWGRLVTLLNRPTDPASLAVFRFLFGLMMVLDIPQERGLSSLDRRYLDGLD VCRFPLLNALQPLPLDWMYLVYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHS YLYGLLAFQLTFMDANHYWSVDGLLNARKRNAHVPLWNYAMLRGQIFIVYFIAGVKKLDADWVE GYSMEYLSRHWLFSPFKLVLSEEMTSLLVVHWCGLLLDLSAGFLLFFDASRSIGLLFVSYFHCM NSQLFSIGMFPYVMLASSPLFCSPEWPRKLVSRFPERLQELLPLKAAPQPSMSCVYKRSRAKGG QKPGLRHRLSAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRD GRTGELGYLNPGVFTQSRRWKDHADMLKQYATCLSHLLPKYNVTEPQIYFDIWVSINDRFQQRI FDPRVDIVQAAWSPFQRTPWLQPLLMDLSPWRTKLQEIKSSLDNHTEVVFIADFPGLHLENFVS EDLGNTSIQLLQGEVTVELVAEQKNQTLHEGEKMQLPAGEYHKVYTISPGPSCYMYIYVNTTEL ALEQDLAYLQELKEKVENGTETGPLPPELQPLLEGEVQGGPEPTPLVQTFLRRQRRLQELERRR NTPFHERLSRFLLRKLYIFRRSFLMTCISLRNLALGRPSLEQLAQEVTYANLRPFEPVGESGHS NTDSSNSNPSELNSDPVHSEF hide sequence

RefSeq Acc Id:	XP_013975851 ⟸ XM_014120376
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQTTTGALIYPLPVTHLEEEKTKARHRCFQILQGWSCGRGSRLPLCEPRGAELEPRVEVAVRQS HVRRRGPTRAAQQCCPGRRSVDGLLNARKRNAHVPLWNYAMLRGQIFIVYFIAGVKKLDADWVE GYSMEYLSRHWLFSPFKLVLSEEMTSLLVVHWCGLLLDLSAGFLLFFDASRSIGLLFVSYFHCM NSQLFSIGMFPYVMLASSPLFCSPEWPRKLVSRFPERLQELLPLKAAPQPSMSCVYKRSRAKGG QKPGLRHRLSAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRD GRTGELGYLNPGVFTQSRRWKDHADMLKQYATCLSHLLPKYNVTEPQIYFDIWVSINDRFQQRI FDPRVDIVQAAWSPFQRTPWLQPLLMDLSPWRTKLQEIKSSLDNHTEVVFIADFPGLHLENFVS EDLGNTSIQLLQGEVTVELVAEQKNQTLHEGEKMQLPAGEYHKVYTISPGPSCYMYIYVNTTEL ALEQDLAYLQELKEKVENGTETGPLPPELQPLLEGEVQGGPEPTPLVQTFLRRQRRLQELERRR NTPFHERLSRFLLRKLYIFRRSFLMTCISLRNLALGRPSLEQLAQEVTYANLRPFEPVGESGHS NTDSSNSNPSELNSDPVHSEF hide sequence

RefSeq Acc Id:

ENSCAFP00000048819 ⟸ ENSCAFT00000088625

RefSeq Acc Id:

ENSCAFP00000011457 ⟸ ENSCAFT00000012362

RefSeq Acc Id:

ENSCAFP00000057679 ⟸ ENSCAFT00000085156

RefSeq Acc Id:	XP_038354920 ⟸ XM_038498992
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038354921 ⟸ XM_038498993
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038354922 ⟸ XM_038498994
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038481548 ⟸ XM_038625620
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038481549 ⟸ XM_038625621
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038481550 ⟸ XM_038625622
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038547469 ⟸ XM_038691541
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KQG7 (UniProtKB/TrEMBL), A0A8C0N2L1 (UniProtKB/TrEMBL), A0A8I3NVM5 (UniProtKB/TrEMBL), A0A8C0Q803 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038547470 ⟸ XM_038691542
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038547471 ⟸ XM_038691543
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038417507 ⟸ XM_038561579
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KQG7 (UniProtKB/TrEMBL), A0A8C0N2L1 (UniProtKB/TrEMBL), A0A8C0Q803 (UniProtKB/TrEMBL), A0A8I3NVM5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038417508 ⟸ XM_038561580
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038417509 ⟸ XM_038561581
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Q9X9 (UniProtKB/TrEMBL), A0A8I3NHI7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845020063 ⟸ ENSCAFT00845025480

RefSeq Acc Id:

ENSCAFP00845020123 ⟸ ENSCAFT00845025554

RefSeq Acc Id:

ENSCAFP00845020093 ⟸ ENSCAFT00845025523

Protein Domains

HTTM

Promoters

RGD ID:

13686285

Promoter ID:

EPDNEW_C4353

Type:

initiation region

Name:

GGCX_1

Description:

gamma-glutamyl carboxylase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	39,512,302 - 39,512,362	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000007720	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011208	UniProtKB/TrEMBL
	ENSCAFG00040005155	UniProtKB/TrEMBL
	ENSCAFG00845014233	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000012362.5	UniProtKB/TrEMBL
	ENSCAFT00000085156.2	UniProtKB/TrEMBL
	ENSCAFT00000088625.2	UniProtKB/TrEMBL
	ENSCAFT00030020715.1	UniProtKB/TrEMBL
	ENSCAFT00030020847.1	UniProtKB/TrEMBL
	ENSCAFT00030020934.1	UniProtKB/TrEMBL
	ENSCAFT00040009628.1	UniProtKB/TrEMBL
	ENSCAFT00040009667.1	UniProtKB/TrEMBL
	ENSCAFT00040009726.1	UniProtKB/TrEMBL
	ENSCAFT00040009802.1	UniProtKB/TrEMBL
	ENSCAFT00845025480	ENTREZGENE
	ENSCAFT00845025480.1	UniProtKB/TrEMBL
	ENSCAFT00845025523	ENTREZGENE
	ENSCAFT00845025523.1	UniProtKB/TrEMBL
	ENSCAFT00845025554.1	UniProtKB/TrEMBL
InterPro	HTTM	UniProtKB/TrEMBL
	RmlC_Cupin_sf	UniProtKB/TrEMBL
	VKG_COase	UniProtKB/TrEMBL
NCBI Gene	GGCX	ENTREZGENE
PANTHER	PTHR12639	UniProtKB/TrEMBL
	VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE	UniProtKB/TrEMBL
Pfam	VKG_Carbox	UniProtKB/TrEMBL
SMART	HTTM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51182	UniProtKB/TrEMBL
UniProt	A0A8C0KQG7	ENTREZGENE
	A0A8C0MWR7_CANLF	UniProtKB/TrEMBL
	A0A8C0N2L1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Q803	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Q9X9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NHD9_CANLF	UniProtKB/TrEMBL
	A0A8I3NHI7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NVM5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41197	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

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