BCL2L11 (BCL2 like 11) - Rat Genome Database

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Pathways
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Gene: BCL2L11 (BCL2 like 11) Pan paniscus
Analyze
Symbol: BCL2L11
Name: BCL2 like 11
RGD ID: 11800429
Description: ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN apoptotic process involved in embryonic digit morphogenesis (ortholog); B cell homeostasis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); glomerulonephritis (ortholog); sclerosing cholangitis (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); BIM-BCL-2 complex (ortholog); BIM-BCL-xl complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: bcl-2-like protein 11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21216,914,260 - 16,961,753 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A16,917,024 - 16,964,367 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A90,862,070 - 90,909,833 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A112,337,927 - 112,385,079 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A112,337,927 - 112,385,079 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA)
apoptotic process involved in embryonic digit morphogenesis  (IEA,ISO)
B cell homeostasis  (IEA,ISO)
cell-matrix adhesion  (IEA,ISO)
cellular response to amyloid-beta  (ISO)
cellular response to estradiol stimulus  (ISO)
cellular response to nerve growth factor stimulus  (ISO)
developmental pigmentation  (IEA,ISO)
ear development  (IEA,ISO)
extrinsic apoptotic signaling pathway in absence of ligand  (IEA,ISO)
in utero embryonic development  (IEA,ISO)
intrinsic apoptotic signaling pathway in response to DNA damage  (IEA,ISO)
kidney development  (IEA,ISO)
leukocyte homeostasis  (IEA,ISO)
lymphocyte apoptotic process  (IEA,ISO)
lymphocyte homeostasis  (IEA,ISO)
male gonad development  (IEA,ISO)
mammary gland development  (IEA,ISO)
meiosis I  (IEA)
myeloid cell homeostasis  (IEA,ISO)
odontogenesis of dentin-containing tooth  (IEA,ISO)
positive regulation of apoptotic process  (IEA,ISO)
positive regulation of autophagy in response to ER overload  (ISO)
positive regulation of cell cycle  (IEA,ISO)
positive regulation of fibroblast apoptotic process  (IEA)
positive regulation of intrinsic apoptotic signaling pathway  (ISO)
positive regulation of lymphocyte apoptotic process  (IEA,ISO)
positive regulation of mitochondrial membrane permeability involved in apoptotic process  (IEA,ISO)
positive regulation of neuron apoptotic process  (IEA,ISO)
positive regulation of protein-containing complex assembly  (IEA)
positive regulation of release of cytochrome c from mitochondria  (IEA)
positive regulation of T cell apoptotic process  (IEA,ISO)
post-embryonic development  (IEA,ISO)
regulation of apoptotic process  (IEA,ISO)
regulation of developmental pigmentation  (IEA,ISO)
regulation of organ growth  (IEA,ISO)
response to endoplasmic reticulum stress  (IEA)
spermatogenesis  (IEA,ISO)
spleen development  (IEA,ISO)
T cell apoptotic process  (IEA,ISO)
T cell homeostasis  (IEA,ISO)
thymocyte apoptotic process  (IEA,ISO)
thymus development  (IEA,ISO)
tube formation  (IEA,ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
BCL2L11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21216,914,260 - 16,961,753 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A16,917,024 - 16,964,367 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A90,862,070 - 90,909,833 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A112,337,927 - 112,385,079 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A112,337,927 - 112,385,079 (+)Ensemblpanpan1.1panPan2
BCL2L11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382111,120,914 - 111,168,445 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2111,119,378 - 111,168,444 (+)EnsemblGRCh38hg38GRCh38
GRCh372111,878,491 - 111,926,022 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362111,594,962 - 111,642,493 (+)NCBINCBI36Build 36hg18NCBI36
Build 342111,597,540 - 111,640,814NCBI
Celera2105,529,086 - 105,576,607 (+)NCBICelera
Cytogenetic Map2q13NCBI
HuRef2104,757,646 - 104,805,166 (+)NCBIHuRef
CHM1_12111,882,732 - 111,930,286 (+)NCBICHM1_1
T2T-CHM13v2.02111,543,978 - 111,591,507 (+)NCBIT2T-CHM13v2.0
Bcl2l11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392127,967,958 - 128,004,467 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2127,967,958 - 128,004,467 (+)EnsemblGRCm39 Ensembl
GRCm382128,126,038 - 128,162,547 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2128,126,038 - 128,162,547 (+)EnsemblGRCm38mm10GRCm38
MGSCv372127,951,774 - 127,988,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362127,817,479 - 127,853,613 (+)NCBIMGSCv36mm8
Celera2129,356,352 - 129,393,704 (+)NCBICelera
Cytogenetic Map2F1NCBI
cM Map262.23NCBI
Bcl2l11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83135,820,042 - 135,857,330 (+)NCBIGRCr8
mRatBN7.23115,366,783 - 115,404,068 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3115,366,646 - 115,404,068 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3119,256,253 - 119,293,586 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03127,851,801 - 127,889,132 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03125,512,142 - 125,549,477 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03120,726,906 - 120,764,192 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3120,726,906 - 120,764,192 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03126,567,484 - 126,604,461 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43115,692,323 - 115,722,701 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13115,597,895 - 115,628,274 (+)NCBI
Celera3114,200,283 - 114,237,903 (+)NCBICelera
Cytogenetic Map3q36NCBI
Bcl2l11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554702,740,682 - 2,780,225 (-)NCBIChiLan1.0ChiLan1.0
BCL2L11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11735,619,804 - 35,665,782 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1735,619,582 - 35,664,587 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1735,391,228 - 35,441,388 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01736,397,661 - 36,447,779 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1736,397,342 - 36,445,321 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11735,515,071 - 35,565,168 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01735,589,049 - 35,639,236 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01735,800,089 - 35,850,247 (+)NCBIUU_Cfam_GSD_1.0
Bcl2l11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629281,122,091 - 81,156,497 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493678318,194 - 50,983 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493678315,493 - 50,959 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BCL2L11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl345,160,155 - 45,201,186 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1345,156,791 - 45,202,996 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2347,180,506 - 47,223,992 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BCL2L11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11414,178,159 - 14,205,337 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660805,463,438 - 5,508,960 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bcl2l11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247491,091,096 - 1,125,341 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247491,033,824 - 1,130,099 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000058117   ⟹   ENSPPAP00000035229
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,337,927 - 112,385,079 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058121   ⟹   ENSPPAP00000035233
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,337,927 - 112,385,079 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058144   ⟹   ENSPPAP00000035257
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,337,927 - 112,385,079 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058148   ⟹   ENSPPAP00000035260
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,337,927 - 112,362,980 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058157   ⟹   ENSPPAP00000035269
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,337,927 - 112,345,548 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058167   ⟹   ENSPPAP00000035279
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,340,471 - 112,378,070 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058171   ⟹   ENSPPAP00000035283
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,340,471 - 112,370,456 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058175   ⟹   ENSPPAP00000035287
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,340,471 - 112,370,439 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058182   ⟹   ENSPPAP00000035294
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,340,471 - 112,368,505 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000058183   ⟹   ENSPPAP00000035295
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A112,340,471 - 112,361,205 (+)Ensembl
RefSeq Acc Id: XM_003804707   ⟹   XP_003804755
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,961,753 (-)NCBI
NHGRI_mPanPan12A16,917,024 - 16,964,367 (-)NCBI
Mhudiblu_PPA_v02A90,862,070 - 90,909,833 (-)NCBI
PanPan1.12A112,337,927 - 112,385,079 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003804711   ⟹   XP_003804759
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,961,603 (-)NCBI
NHGRI_mPanPan12A16,917,024 - 16,964,367 (-)NCBI
Mhudiblu_PPA_v02A90,862,070 - 90,909,833 (-)NCBI
PanPan1.12A112,337,927 - 112,385,079 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962889   ⟹   XP_008961137
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,961,603 (-)NCBI
NHGRI_mPanPan12A16,917,024 - 16,964,367 (-)NCBI
Mhudiblu_PPA_v02A90,862,070 - 90,909,833 (-)NCBI
PanPan1.12A112,337,927 - 112,385,079 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055107424   ⟹   XP_054963399
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,928,793 - 16,961,753 (-)NCBI
NHGRI_mPanPan12A16,931,557 - 16,964,367 (-)NCBI
RefSeq Acc Id: XM_063594535   ⟹   XP_063450605
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594536   ⟹   XP_063450606
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,938,151 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594537   ⟹   XP_063450607
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,928,793 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594538   ⟹   XP_063450608
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594539   ⟹   XP_063450609
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,938,151 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594540   ⟹   XP_063450610
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,914,260 - 16,960,011 (-)NCBI
RefSeq Acc Id: XM_063594541   ⟹   XP_063450611
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,938,151 - 16,961,603 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003804755   ⟸   XM_003804707
- Peptide Label: isoform X7
- UniProtKB: A0A2R9CA30 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008961137   ⟸   XM_008962889
- Peptide Label: isoform X9
- UniProtKB: A0A2R9C018 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003804759   ⟸   XM_003804711
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: ENSPPAP00000035233   ⟸   ENSPPAT00000058121
RefSeq Acc Id: ENSPPAP00000035257   ⟸   ENSPPAT00000058144
RefSeq Acc Id: ENSPPAP00000035260   ⟸   ENSPPAT00000058148
RefSeq Acc Id: ENSPPAP00000035269   ⟸   ENSPPAT00000058157
RefSeq Acc Id: ENSPPAP00000035229   ⟸   ENSPPAT00000058117
RefSeq Acc Id: ENSPPAP00000035279   ⟸   ENSPPAT00000058167
RefSeq Acc Id: ENSPPAP00000035283   ⟸   ENSPPAT00000058171
RefSeq Acc Id: ENSPPAP00000035287   ⟸   ENSPPAT00000058175
RefSeq Acc Id: ENSPPAP00000035294   ⟸   ENSPPAT00000058182
RefSeq Acc Id: ENSPPAP00000035295   ⟸   ENSPPAT00000058183
RefSeq Acc Id: XP_054963399   ⟸   XM_055107424
- Peptide Label: isoform X8
- UniProtKB: A0A2R9C052 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450610   ⟸   XM_063594540
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063450608   ⟸   XM_063594538
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063450605   ⟸   XM_063594535
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063450607   ⟸   XM_063594537
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063450611   ⟸   XM_063594541
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063450609   ⟸   XM_063594539
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063450606   ⟸   XM_063594536
- Peptide Label: isoform X2
Protein Domains
Apoptosis Bim N-terminal   Bcl-x interacting BH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040431 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000058117.1 UniProtKB/TrEMBL
  ENSPPAT00000058121.1 UniProtKB/TrEMBL
  ENSPPAT00000058144.1 UniProtKB/TrEMBL
  ENSPPAT00000058148.1 UniProtKB/TrEMBL
  ENSPPAT00000058157.1 UniProtKB/TrEMBL
  ENSPPAT00000058167.1 UniProtKB/TrEMBL
  ENSPPAT00000058171.1 UniProtKB/TrEMBL
  ENSPPAT00000058175.1 UniProtKB/TrEMBL
  ENSPPAT00000058182.1 UniProtKB/TrEMBL
  ENSPPAT00000058183.1 UniProtKB/TrEMBL
InterPro Apoptosis_Bim_N UniProtKB/TrEMBL
  Bcl-2-like_11 UniProtKB/TrEMBL
  Bcl-x_interacting_BH3_dom UniProtKB/TrEMBL
KEGG Report pps:100973549 UniProtKB/TrEMBL
NCBI Gene BCL2L11 ENTREZGENE
PANTHER BCL-2-LIKE PROTEIN 11 UniProtKB/TrEMBL
  BCL2 INTERACTING MEDIATOR OF CELL DEATH UniProtKB/TrEMBL
Pfam Bclx_interact UniProtKB/TrEMBL
  Bim_N UniProtKB/TrEMBL
PIRSF Bcl-2-like_p11 UniProtKB/TrEMBL
UniProt A0A2R9BZX9_PANPA UniProtKB/TrEMBL
  A0A2R9C018 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C027_PANPA UniProtKB/TrEMBL
  A0A2R9C052 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C366_PANPA UniProtKB/TrEMBL
  A0A2R9C398_PANPA UniProtKB/TrEMBL
  A0A2R9CA30 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CA73_PANPA UniProtKB/TrEMBL
  A0A2R9CA84_PANPA UniProtKB/TrEMBL
  A0A2R9CA99_PANPA UniProtKB/TrEMBL