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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal coat/hair pigmentation
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Accession:MP:0002075 term browser browse the term
Definition:irregular or unusual pigmentation of the hair
Synonyms:exact_synonym: abnormal coat color;   abnormal coat colour;   abnormal hair pigmentation;   coat: color anomalies;   coat: colour anomalies
 alt_id: MP:0000368
 xref: MGI:2173541


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abnormal coat/hair pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B IAGP RGD PMID:8570650 RGD:628515 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Ednrbsl endothelin receptor type B, spotting lethal IAGP RGD PMID:8570650 RGD:628515
G Rab38 RAB38, member RAS oncogene family IAGP DNA:point mutation:exon:p.M1I RGD PMID:15112108 RGD:1300411 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924 		JBrowse link
G Rab38ru Rab38, member of RAS oncogene family, ruby allele IAGP DNA:point mutation:exon:p.M1I (rat) RGD PMID:15112108 RGD:1300411
absent coat pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyr tyrosinase IMP
IAGP		 DNA:deletion:cds:
DNA:missense mutation:exon:p.R299H		 RGD PMID:23409244 PMID:15760344 RGD:12792973, RGD:1599687 NCBI chr 1:141,115,036...141,210,207
Ensembl chr 1:141,115,036...141,210,207 		JBrowse link
G Tyrem1Kyo tyrosinase; TALEN induced mutant1, Kyo IMP RGD PMID:23409244 RGD:12792973
belly spot term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:1912576 RGD:5133424 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G KitWs KIT proto-oncogene receptor tyrosine kinase; mutant 1 IMP RGD PMID:1912576 RGD:5133424
darkened coat color term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrn attractin IAGP DNA:deletion RGD PMID:11209055 RGD:67998 NCBI chr 3:118,110,320...118,244,326
Ensembl chr 3:118,110,229...118,244,322 		JBrowse link
diluted coat color term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:1912576 RGD:5133424 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G KitWs KIT proto-oncogene receptor tyrosine kinase; mutant 1 IMP RGD PMID:1912576 RGD:5133424
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5403
    pigmentation phenotype 55
      abnormal coat/hair pigmentation 32
        abnormal agouti pigmentation + 2
        abnormal dorsoventral coat patterning 0
        abnormal flank coat pigmentation 0
        abnormal front foot hair pigmentation 0
        abnormal hair follicle melanocyte morphology + 0
        abnormal hair follicle melanogenesis 0
        abnormal hair shaft melanin granule morphology + 0
        abnormal hind foot hair pigmentation 0
        abnormal pinna hair pigmentation 0
        abnormal rostrocaudal coat patterning 0
        abnormal tail hair pigmentation 0
        abnormal ventral coat pigmentation 0
        absent coat pigmentation 3
        belly blaze 0
        belted 0
        black belted 0
        diluted coat color 3
        grizzled coat color 0
        head blaze 0
        irregular coat pigmentation + 1
        white spotting + 5
Path 2
Term Annotations click to browse term
  mammalian phenotype 5403
    integument phenotype 171
      abnormal skin adnexa morphology 169
        abnormal coat/ hair morphology 63
          abnormal coat appearance 63
            abnormal coat/hair pigmentation 32
              abnormal agouti pigmentation + 2
              abnormal dorsoventral coat patterning 0
              abnormal flank coat pigmentation 0
              abnormal front foot hair pigmentation 0
              abnormal hair follicle melanocyte morphology + 0
              abnormal hair follicle melanogenesis 0
              abnormal hair shaft melanin granule morphology + 0
              abnormal hind foot hair pigmentation 0
              abnormal pinna hair pigmentation 0
              abnormal rostrocaudal coat patterning 0
              abnormal tail hair pigmentation 0
              abnormal ventral coat pigmentation 0
              absent coat pigmentation 3
              belly blaze 0
              belted 0
              black belted 0
              diluted coat color 3
              grizzled coat color 0
              head blaze 0
              irregular coat pigmentation + 1
              white spotting + 5
paths to the root