ONTOLOGY REPORT - ANNOTATIONS
Term: PML body
Accession: GO:0016605
browse the term
Definition: A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection.
Synonyms: exact_synonym: ND10; PML NB; PML nuclear body
related_synonym: nuclear dot
only_in_taxon: NCBITaxon:6072 ! Eumetazoa
GViewer not supported for the selected species.
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ANKRD2
ankyrin repeat domain 2
located_in
ISO
(PMID:24434510)
MGI
PMID:24434510
NCBI chr 9:90,733,138...90,745,872
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ATR
ATR serine/threonine kinase
located_in
ISO
(PMID:12814551)
UniProt
PMID:12814551
NCBI chr15:48,048,785...48,173,120
Ensembl chr15:48,048,882...48,173,137
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ATRX
ATRX chromatin remodeler
located_in
ISO
(MGI:5705215|PMID:23444137)
BHF-UCL
PMID:23444137
MGI:5705215
NCBI chr X:66,449,830...66,737,220
Ensembl chr X:66,448,449...66,737,164
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BASP1
brain abundant membrane attached signal protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:16,871,488...16,937,685
Ensembl chr 4:16,936,178...16,936,858
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BLM
BLM RecQ like helicase
located_in
ISO
(PMID:10728666), (PMID:10779560)
UniProt
PMID:10728666 PMID:10779560
NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
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BMAL1
basic helix-loop-helix ARNT like 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 1:51,430,670...51,540,344
Ensembl chr 1:51,431,180...51,462,674
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CALCOCO2
calcium binding and coiled-coil domain 2
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr16:69,242,720...69,274,364
Ensembl chr16:69,251,963...69,273,384
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CASP8AP2
caspase 8 associated protein 2
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr13:14,586,857...14,632,384
Ensembl chr13:14,586,929...14,632,362
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CBX5
chromobox 5
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:50,350,440...50,396,595
Ensembl chr11:50,353,638...50,396,608
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CDK9
cyclin dependent kinase 9
located_in
ISO
(PMID:18250157)
UniProt
PMID:18250157
NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
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CHD3
chromodomain helicase DNA binding protein 3
located_in
ISO
(PMID:27068747)
UniProt
PMID:27068747
NCBI chr16:7,274,634...7,300,831
Ensembl chr16:7,276,850...7,300,832
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CHEK2
checkpoint kinase 2
located_in
ISO
(PMID:12402044)
UniProt
PMID:12402044
NCBI chr19:11,567,529...11,621,180
Ensembl chr19:11,567,528...11,604,792
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CHFR
checkpoint with forkhead and ring finger domains
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr11:128,175,768...128,207,710
Ensembl chr11:128,175,515...128,207,443
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CIITA
class II major histocompatibility complex transactivator
located_in
ISO
(PMID:23007646)
UniProt
PMID:23007646
NCBI chr 5:10,341,690...10,401,988
Ensembl chr 5:10,372,344...10,400,451
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CSNK2A1
casein kinase 2 alpha 1
is_active_in
ISO
(PMID:20719947)
UniProt
PMID:20719947
NCBI chr 2:55,982,259...56,047,023
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CSNK2B
casein kinase 2 beta
located_in is_active_in
IEA ISO
(PMID:20719947)
Ensembl UniProt
PMID:20719947
GO_REF:0000107
NCBI chr17:40,354,520...40,359,136
Ensembl chr17:40,352,367...40,358,401
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DAPK3
death associated protein kinase 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:3,713,179...3,729,223
Ensembl chr 6:3,712,170...3,727,929
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DAXX
death domain associated protein
located_in
IEA
Ensembl TreeGrafter UniProt
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chr17:38,754,227...38,758,714
Ensembl chr17:38,754,280...38,759,071
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EIF3E
eukaryotic translation initiation factor 3 subunit E
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 8:102,915,111...102,960,669
Ensembl chr 8:102,915,252...102,960,559
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ELF4
E74 like ETS transcription factor 4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:105,321,440...105,366,489
Ensembl chr X:105,320,952...105,337,560
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GCNA
germ cell nuclear acidic peptidase
located_in
ISO
(PMID:30914427)
UniProt
PMID:30914427
NCBI chr X:61,395,585...61,428,773
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HIPK1
homeodomain interacting protein kinase 1
located_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr20:19,680,952...19,731,503
Ensembl chr20:19,680,778...19,730,129
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HIPK2
homeodomain interacting protein kinase 2
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr21:108,310,782...108,533,274
Ensembl chr21:108,322,096...108,533,226
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HIPK3
homeodomain interacting protein kinase 3
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr 1:31,944,760...32,009,328
Ensembl chr 1:31,944,749...32,009,297
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HSF1
heat shock transcription factor 1
located_in
ISO
(PMID:11514557)
UniProt
PMID:11514557
NCBI chr 8:138,503,836...138,529,562
Ensembl chr 8:138,503,831...138,529,165
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IKBKE
inhibitor of nuclear factor kappa B kinase subunit epsilon
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr25:22,865,720...22,892,346
Ensembl chr25:22,865,734...22,891,920
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ISG20
interferon stimulated exonuclease gene 20
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr29:7,178,118...7,195,460
Ensembl chr29:7,178,769...7,196,387
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KAT6A
lysine acetyltransferase 6A
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:39,912,120...40,035,776
Ensembl chr 8:39,911,776...39,962,735
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KLHL20
kelch like family member 20
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr25:55,407,648...55,473,195
Ensembl chr25:55,405,713...55,473,175
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LOC103215904
small ubiquitin-related modifier 1-like
located_in
IEA
TreeGrafter UniProt
GO_REF:0000044 GO_REF:0000118
NCBI chr 9:48,155,889...48,156,881
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LOC103224824
small ubiquitin-related modifier 1-like
located_in
IEA
TreeGrafter UniProt
GO_REF:0000044 GO_REF:0000118
NCBI chr20:81,494,509...81,496,031
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LOC103231594
brain acid soluble protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:11,075,901...11,077,476
Ensembl chr 4:16,936,178...16,936,858
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LOC103244039
small ubiquitin-related modifier 5
located_in
IEA
UniProt TreeGrafter
GO_REF:0000044 GO_REF:0000118
NCBI chr 2:10,164,883...10,165,860
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LOC119620934
E3 ubiquitin-protein ligase RNF4-like
located_in
IEA
TreeGrafter
GO_REF:0000118
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LRCH4
leucine rich repeats and calponin homology domain containing 4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr28:12,627,666...12,639,312
Ensembl chr28:12,627,712...12,638,228
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MAPK7
mitogen-activated protein kinase 7
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:17,962,827...17,969,027
Ensembl chr16:17,964,408...17,968,714
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MAX
MYC associated factor X
ISO
RGD
PMID:15503302
RGD:2316819
NCBI chr24:42,288,891...42,314,711
Ensembl chr24:42,291,106...42,314,605
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MLIP
muscular LMNA interacting protein
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:17,254,118...17,512,265
Ensembl chr17:17,252,186...17,503,406
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MORC3
MORC family CW-type zinc finger 3
is_active_in located_in
ISO IEA
(PMID:27440897)
UniProt TreeGrafter
PMID:27440897
GO_REF:0000118
NCBI chr 2:80,316,047...80,370,971
Ensembl chr 2:80,315,940...80,374,457
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MRE11
MRE11 homolog, double strand break repair nuclease
located_in
ISO
(MGI:5705215|PMID:23444137) (PMID:10811102)
BHF-UCL
PMID:10811102 PMID:23444137
MGI:5705215
NCBI chr 1:85,615,448...85,694,247
Ensembl chr 1:85,610,819...85,694,269
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MTOR
mechanistic target of rapamycin kinase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
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N4BP1
NEDD4 binding protein 1
located_in
IEA
Ensembl UniProt TreeGrafter
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chr 5:34,351,845...34,423,152
Ensembl chr 5:34,347,979...34,422,887
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NBN
nibrin
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028
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NR2C1
nuclear receptor subfamily 2 group C member 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr11:90,430,307...90,481,269
Ensembl chr11:90,430,194...90,481,493
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NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:119,679,090...119,949,212
Ensembl chr 8:119,691,106...119,949,587
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PARK7
Parkinsonism associated deglycase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:123,776,084...123,808,031
Ensembl chr20:123,776,297...123,798,434
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PATL1
PAT1 homolog 1, processing body mRNA decay factor
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 1:13,955,730...13,989,364
Ensembl chr 1:13,957,050...13,988,488
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PIAS1
protein inhibitor of activated STAT 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:15,294,296...15,432,731
Ensembl chr26:15,297,934...15,432,659
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PIAS2
protein inhibitor of activated STAT 2
located_in
ISO
(PMID:22406621)
UniProt
PMID:22406621
NCBI chr18:33,967,894...34,075,824
Ensembl chr18:33,967,999...34,067,910
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PML
PML nuclear body scaffold
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931
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PPARGC1A
PPARG coactivator 1 alpha
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582
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PTEN
phosphatase and tensin homolog
located_in
IEA
UniProt
GO_REF:0000044 GO_REF:0000104
NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
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RAD51
RAD51 recombinase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:42,281,085...42,319,394
Ensembl chr26:42,279,608...42,318,169
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RB1
RB transcriptional corepressor 1
located_in
ISO
(PMID:9448006)
UniProt
PMID:9448006
NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546
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RFWD3
ring finger and WD repeat domain 3
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 5:53,045,408...53,092,214
Ensembl chr 5:53,045,465...53,092,494
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RNF111
ring finger protein 111
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr26:24,416,946...24,528,989
Ensembl chr26:24,416,093...24,528,862
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RNF4
ring finger protein 4
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr27:46,245,786...46,290,671
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RNF6
ring finger protein 6
located_in
ISO
(PMID:11971979)
MGI
PMID:11971979
NCBI chr 3:5,461,053...5,471,268
Ensembl chr 3:5,462,126...5,468,555
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RPA1
replication protein A1
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
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RPA2
replication protein A2
located_in
ISO
(PMID:12814551), (PMID:17959650)
UniProt
PMID:12814551 PMID:17959650
NCBI chr20:104,882,739...104,904,612
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RPA2
replication protein A2
located_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr20:104,883,027...104,904,951
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RPAIN
RPA interacting protein
located_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:4,829,096...4,843,302
Ensembl chr16:4,829,248...4,846,415
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SATB1
SATB homeobox 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:63,163,989...63,263,122
Ensembl chr15:63,170,243...63,263,149
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SENP2
SUMO specific peptidase 2
located_in
ISO
(MGI:2670563|PMID:12419228)
UniProt
PMID:12419228
MGI:2670563
NCBI chr15:3,805,916...3,853,529
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SIMC1
SUMO interacting motifs containing 1
located_in
ISO
(PMID:36373674)
UniProt
PMID:36373674
NCBI chr23:78,255,678...78,345,307
Ensembl chr23:78,255,754...78,344,759
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SIRT1
sirtuin 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
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SKI
SKI proto-oncogene
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:129,243,033...129,324,162
Ensembl chr20:129,242,445...129,324,138
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SKIL
SKI like proto-oncogene
located_in
ISO
(PMID:19383336)
UniProt
PMID:19383336
NCBI chr15:19,022,167...19,059,117
Ensembl chr15:19,022,017...19,057,004
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SLF2
SMC5-SMC6 complex localization factor 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:93,919,373...93,983,499
Ensembl chr 9:93,931,456...93,980,297
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SMC5
structural maintenance of chromosomes 5
located_in
ISO
(MGI:5819345|PMID:19793919) (PMID:17589526), (PMID:36373674)
BHF-UCL UniProt
PMID:17589526 PMID:19793919 PMID:36373674
MGI:5819345
NCBI chr12:81,317,689...81,426,196
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SMC6
structural maintenance of chromosomes 6
located_in
ISO
(PMID:17589526), (PMID:36373674)
UniProt
PMID:17589526 PMID:36373674
NCBI chr14:89,917,621...90,005,604
Ensembl chr14:89,917,518...90,000,088
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SP100
SP100 nuclear antigen
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:116,454,261...116,587,093
Ensembl chr10:116,459,050...116,590,215
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SPTBN4
spectrin beta, non-erythrocytic 4
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:34,926,413...35,036,611
Ensembl chr 6:34,930,519...35,035,719
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SQSTM1
sequestosome 1
located_in
ISO
(PMID:20168092)
UniProt
PMID:20168092
NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
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SRSF2
serine and arginine rich splicing factor 2
NOT|located_in
ISO
(PMID:15652350)
UniProt
PMID:15652350
NCBI chr16:44,945,193...44,948,496
Ensembl chr16:44,945,200...44,946,438
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SUMO1
small ubiquitin like modifier 1
located_in
IEA
UniProt TreeGrafter
GO_REF:0000044 GO_REF:0000118
NCBI chr10:87,917,324...87,957,152
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SUMO2
small ubiquitin like modifier 2
located_in
ISO
(PMID:22406621), (PMID:27068747)
UniProt
PMID:22406621 PMID:27068747
NCBI chr16:46,479,399...46,495,591
Ensembl chr16:46,479,406...46,496,114
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SUMO3
small ubiquitin like modifier 3
located_in
ISO
(PMID:19050011), (PMID:27068747)
UniProt
PMID:19050011 PMID:27068747
NCBI chr 2:88,516,906...88,529,098
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TDG
thymine DNA glycosylase
located_in
ISO
(PMID:15569683)
MGI
PMID:15569683
NCBI chr11:99,168,051...99,191,168
Ensembl chr11:99,181,608...99,193,591
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TDP2
tyrosyl-DNA phosphodiesterase 2
located_in
IEA
UniProt TreeGrafter Ensembl
GO_REF:0000044 GO_REF:0000107 GO_REF:0000118
NCBI chr17:47,582,857...47,599,871
Ensembl chr17:47,583,014...47,600,628
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TERT
telomerase reverse transcriptase
located_in
IEA
Ensembl UniProt
GO_REF:0000044 GO_REF:0000107
NCBI chr 4:1,082,894...1,119,373
Ensembl chr 4:1,083,384...1,117,468
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TOP3A
DNA topoisomerase III alpha
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:17,315,466...17,358,863
Ensembl chr16:17,316,048...17,358,580
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TOPBP1
DNA topoisomerase II binding protein 1
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:56,679,333...56,740,773
Ensembl chr15:56,679,426...56,741,566
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TOPORS
TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:47,702,638...47,714,309
Ensembl chr12:47,702,995...47,714,338
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TP53
tumor protein p53
located_in
IEA
UniProt Ensembl
GO_REF:0000044 GO_REF:0000107
NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
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TRIM16
tripartite motif containing 16
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:14,874,159...14,897,958
Ensembl chr16:14,871,657...14,897,865
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TRIM8
tripartite motif containing 8
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:95,671,622...95,686,701
Ensembl chr 9:95,672,648...95,689,247
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UBE2I
ubiquitin conjugating enzyme E2 I
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:1,203,513...1,216,662
Ensembl chr 5:1,200,018...1,216,741
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USP7
ubiquitin specific peptidase 7
located_in is_active_in
IEA ISO
(PMID:20719947)
Ensembl UniProt
PMID:20719947
GO_REF:0000107
NCBI chr 5:8,470,137...8,540,736
Ensembl chr 5:8,469,230...8,540,770
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WDFY3
WD repeat and FYVE domain containing 3
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:33,031,762...33,331,475
Ensembl chr 7:33,030,069...33,237,701
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ZBED1
zinc finger BED-type containing 1
located_in
ISO
(PMID:25210186), (PMID:27068747)
UniProt
PMID:25210186 PMID:27068747
NCBI chr X:603,749...618,949
Ensembl chr X:605,953...608,037
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ZBTB16
zinc finger and BTB domain containing 16
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344
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ZCCHC12
zinc finger CCHC-type containing 12
located_in
ISO
(PMID:19416967)
MGI
PMID:19416967
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ZMYM2
zinc finger MYM-type containing 2
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:890,747...1,018,558
Ensembl chr 3:893,857...1,017,283
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ZNF451
zinc finger protein 451
located_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:14,434,878...14,516,914
Ensembl chr17:14,433,977...14,516,788
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