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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:hallucinogen dependence
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Accession:DOID:9977 term browser browse the term
Definition:A drug dependence that involves the continued use of hallucinogenic drugs despite problems related to use of the substance. (DO)
Synonyms:primary_id: RDO:9002646
 xref: ICD10CM:F16.2;   ICD9CM:304.5;   NCI:C34657

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cannabis dependence term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G ABCB1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr21:61,211,044...61,430,691
Ensembl chr21:61,322,748...61,529,274 		JBrowse link
G P ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G S Abcb1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G D ABCB1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727 		JBrowse link
G B ABCB1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238 		JBrowse link
G C Abcb1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G H ABCB1 ATP binding cassette subfamily B member 1 susceptibility IAGP DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323 		JBrowse link
G R Abcb1a ATP binding cassette subfamily B member 1A susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G M Abcb1a ATP-binding cassette, sub-family B member 1A susceptibility ISO DNA:SNP: :3435C>T (rs1045642) (human) RGD PMID:19625010 RGD:401901192 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575 		JBrowse link
G N Comt catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chrNW_004624747:569,127...588,479
Ensembl chrNW_004624747:581,832...588,333 		JBrowse link
G G COMT catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr19:5,775,829...5,803,260
Ensembl chr19:5,773,225...5,785,422 		JBrowse link
G P COMT catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998 		JBrowse link
G S Comt catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G D COMT catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008 		JBrowse link
G B COMT catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387 		JBrowse link
G C Comt catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412 		JBrowse link
G R Comt catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G M Comt catechol-O-methyltransferase ISO DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602 		JBrowse link
G H COMT catechol-O-methyltransferase IDA DNA:hypermethylation:promoter RGD PMID:24902721 RGD:401940112 NCBI chr22:19,941,772...19,969,975
Ensembl chr22:19,941,371...19,969,975 		JBrowse link
G N Hcrt hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chrNW_004624795:1,744,782...1,747,360
Ensembl chrNW_004624795:1,744,648...1,746,633 		JBrowse link
G G HCRT hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr16:64,083,199...64,085,393
Ensembl chr16:64,084,070...64,085,292 		JBrowse link
G P HCRT hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr12:20,588,597...20,589,991
Ensembl chr12:20,588,027...20,589,988 		JBrowse link
G S Hcrt hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chrNW_004936490:17,007,001...17,008,363
Ensembl chrNW_004936490:17,006,997...17,008,369 		JBrowse link
G D HCRT hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr 9:20,729,616...20,732,074
Ensembl chr 9:20,730,779...20,732,028 		JBrowse link
G B HCRT hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr17:15,130,581...15,132,024
Ensembl chr17:15,353,203...15,354,594 		JBrowse link
G C Hcrt hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chrNW_004955451:16,235,819...16,237,457
Ensembl chrNW_004955451:16,235,819...16,237,457 		JBrowse link
G R Hcrt hypocretin neuropeptide precursor ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr10:85,689,979...85,691,214
Ensembl chr10:85,689,465...85,691,210 		JBrowse link
G M Hcrt hypocretin ISO mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr11:100,652,519...100,653,757
Ensembl chr11:100,651,895...100,653,757 		JBrowse link
G H HCRT hypocretin neuropeptide precursor IEP mRNA:increased expression:blood (human) RGD PMID:22846875 RGD:401960066 NCBI chr17:42,184,060...42,185,452
Ensembl chr17:42,184,060...42,185,452 		JBrowse link
G N Nrg1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chrNW_004624780:11,297,306...11,525,236
Ensembl chrNW_004624780:11,301,182...12,424,066 		JBrowse link
G G NRG1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr 8:29,745,984...30,862,140
Ensembl chr 8:30,635,803...30,856,487 		JBrowse link
G P NRG1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G S Nrg1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G D NRG1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932 		JBrowse link
G B NRG1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977 		JBrowse link
G C Nrg1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chrNW_004955463:8,009,436...9,037,116
Ensembl chrNW_004955463:8,009,530...9,037,116 		JBrowse link
G R Nrg1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G M Nrg1 neuregulin 1 susceptibility ISO DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G H NRG1 neuregulin 1 susceptibility IAGP DNA:SNP: :rs17664708(human) RGD PMID:22520967 RGD:405115756 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 175454
    Chemically-Induced Disorders 12295
      substance-related disorder 6038
        substance dependence 1422
          drug dependence 933
            hallucinogen dependence 39
              cannabis dependence 39
Path 2
Term Annotations click to browse term
  disease 175454
    disease of anatomical entity 168442
      nervous system disease 143041
        central nervous system disease 128046
          brain disease 120113
            disease of mental health 87822
              substance-related disorder 6038
                substance dependence 1422
                  drug dependence 933
                    hallucinogen dependence 39
                      cannabis dependence 39
paths to the root