Vwce (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955511 | 6,235,530 - 6,251,216 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955511 | 6,235,934 - 6,251,186 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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VWCE (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 11 | 61,258,286 - 61,295,316 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 61,255,672 - 61,295,334 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 11 | 61,025,758 - 61,062,788 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 60,782,334 - 60,819,364 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 58,361,797 - 58,398,795 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q12.2 | NCBI | | | | | HuRef | 11 | 57,353,677 - 57,390,704 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 60,908,797 - 60,945,827 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 61,240,163 - 61,284,304 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Vwce (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 19 | 10,611,582 - 10,643,577 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 10,611,577 - 10,643,577 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 19 | 10,634,218 - 10,666,213 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 10,634,213 - 10,666,213 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 19 | 10,708,723 - 10,739,700 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 10,701,281 - 10,732,255 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 11,330,208 - 11,363,207 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | A | NCBI | | | | | cM Map | 19 | 6.87 | NCBI | | | | |
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Vwce (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 216,703,742 - 216,753,284 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 216,707,351 - 216,738,337 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 207,280,714 - 207,327,215 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 207,282,356 - 207,312,986 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 215,661,231 - 215,691,451 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 222,716,699 - 222,746,908 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 215,411,695 - 215,441,905 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Dahl_SR_JrHsd | 1 | 216,068,175 - 216,099,153 (+) | NCBI | | Dahl_SR_JrHsd | | | Lyon_Normotensive | 1 | 220,977,280 - 221,008,262 (+) | NCBI | | Lyon_Normotensive | | | Lyon_Hypertensive | 1 | 217,731,629 - 217,762,612 (+) | NCBI | | Lyon_Hypertensive | | | F344_StmMcwi | 1 | 215,958,430 - 215,989,409 (+) | NCBI | | F344_StmMcwi | | | Rnor_6.0 | 1 | 226,687,258 - 226,717,989 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 226,687,258 - 226,710,897 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 233,754,512 - 233,782,663 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 213,124,884 - 213,159,508 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 204,775,961 - 204,805,797 (+) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 213,283,313 - 213,317,938 (+) | NCBI | | | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
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VWCE (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 9 | 62,425,179 - 62,463,320 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 63,468,839 - 63,510,991 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 56,557,167 - 56,596,311 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 59,922,172 - 59,959,747 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 59,922,172 - 59,959,747 (-) | Ensembl | | | panPan2 | panpan1.1 |
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VWCE (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 18 | 55,099,193 - 55,125,412 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 55,102,452 - 55,126,040 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 53,671,715 - 53,697,876 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 56,146,988 - 56,173,137 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 56,147,011 - 56,173,210 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 18 | 55,207,508 - 55,231,098 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 54,826,983 - 54,852,997 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 55,707,716 - 55,733,842 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Vwce (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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VWCE (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 2 | 10,206,012 - 10,240,148 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 10,206,010 - 10,240,493 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 9,753,388 - 9,786,165 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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VWCE (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 1 | 12,546,241 - 12,583,963 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 12,547,220 - 12,583,577 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666038 | 109,924,936 - 109,963,341 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Vwce (Heterocephalus glaber - naked mole-rat) |
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Vwce (Rattus rattus - black rat) |
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