LOC102555876 (uncharacterized LOC102555876) - Rat Genome Database

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Gene: LOC102555876 (uncharacterized LOC102555876) Rattus norvegicus
Analyze
Symbol: LOC102555876
Name: uncharacterized LOC102555876
RGD ID: 7527839
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X79,732,721 - 79,738,581 (-)NCBIGRCr8
mRatBN7.2X75,616,562 - 75,622,421 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X81,890,700 - 81,898,611 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X82,056,882 - 82,063,161 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX76,872,069 - 76,877,885 (-)NCBICelera
Cytogenetic MapXq31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102555876
11 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_362505
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X79,732,721 - 79,738,581 (-)NCBI
mRatBN7.2X75,616,562 - 75,622,421 (-)NCBI
Rnor_6.0X81,890,700 - 81,898,611 (-)NCBI
Rnor_5.0X82,056,882 - 82,063,161 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1851 BioCyc
NCBI Gene LOC102555876 ENTREZGENE
PhenoGen LOC102555876 PhenoGen
RNAcentral URS0000CCE27A RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-17 LOC102555876  uncharacterized LOC102555876      Symbol and Name status set to provisional 70820 PROVISIONAL