CUNH16orf74 (chromosome unknown C16orf74 homolog) - Rat Genome Database

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Gene: CUNH16orf74 (chromosome unknown C16orf74 homolog) Heterocephalus glaber
Analyze
Symbol: CUNH16orf74 (Ensembl: C16orf74)
Name: chromosome unknown C16orf74 homolog
RGD ID: 18920918
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein C16orf74 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247462,124,160 - 2,141,567 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247462,119,090 - 2,144,239 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
CUNH16orf74
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247462,124,160 - 2,141,567 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247462,119,090 - 2,144,239 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
CLMB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381685,707,517 - 85,751,096 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1685,690,084 - 85,751,129 (-)Ensemblhg38GRCh38
GRCh371685,741,123 - 85,784,702 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361684,298,624 - 84,342,190 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1670,044,265 - 70,087,824 (-)NCBICelera
Cytogenetic Map16q24.1NCBI
HuRef1671,483,238 - 71,526,434 (-)NCBIHuRef
CHM1_11687,152,497 - 87,196,246 (-)NCBICHM1_1
T2T-CHM13v2.01691,773,042 - 91,816,616 (-)NCBIT2T-CHM13v2.0
Clmb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398121,335,341 - 121,361,129 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8121,335,341 - 121,374,371 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm388120,608,602 - 120,634,390 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8120,608,602 - 120,647,632 (-)Ensemblmm10GRCm38
MGSCv378123,132,502 - 123,158,282 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368123,494,579 - 123,520,359 (-)NCBIMGSCv36mm8
MGSCv368120,639,707 - 120,665,625 (-)NCBIMGSCv36mm8
Celera8124,824,261 - 124,844,288 (-)NCBICelera
Cytogenetic Map8E1NCBI
cM Map869.92NCBI
Clmb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81965,568,997 - 65,594,994 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1965,568,997 - 65,595,460 (-)EnsemblGRCr8
mRatBN7.21948,660,288 - 48,686,287 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1948,660,288 - 48,686,349 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1955,454,519 - 55,480,536 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01956,135,287 - 56,161,286 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01958,349,131 - 58,375,582 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1959,366,389 - 59,392,387 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1957,490,007 - 57,516,007 (-)NCBILyon_Normotensive
Lyon_Hypertensive1959,364,302 - 59,390,300 (-)NCBILyon_Hypertensive
F344_StmMcwi1957,097,544 - 57,123,558 (-)NCBIF344_StmMcwi
Rnor_6.01954,184,554 - 54,210,872 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1954,184,946 - 54,210,515 (-)Ensemblrn6Rnor6.0
Rnor_5.01964,906,438 - 64,931,464 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41950,963,265 - 50,989,667 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1947,913,225 - 47,939,423 (-)NCBICelera
RGSC_v3.11950,968,145 - 50,994,344 (-)NCBI
Cytogenetic Map19q12NCBI
CUNH16orf74
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955541824,183 - 843,420 (-)Ensembl
ChiLan1.0NW_004955541824,381 - 843,420 (-)NCBIChiLan1.0ChiLan1.0
C18H16orf74
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21895,457,645 - 95,501,855 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116101,374,921 - 101,419,111 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01666,374,434 - 66,418,478 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11685,711,556 - 85,755,671 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1685,694,710 - 85,755,671 (-)EnsemblpanPan2panpan1.1
C5H16orf74
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1566,945,022 - 66,969,301 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl566,947,136 - 66,979,907 (+)EnsemblcanFam3CanFam3.1
C15H16orf74
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934926,976,740 - 26,998,629 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366412,696,184 - 2,752,057 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366412,730,252 - 2,752,176 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C6H16orf74
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl63,166,929 - 3,217,327 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.163,156,781 - 3,211,165 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.263,490,493 - 3,520,510 (+)NCBISscrofa10.2Sscrofa10.2susScr3
C5H16orf74
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1571,114,015 - 71,158,207 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660474,581,633 - 4,626,465 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
C17H16orf74
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11740,249,493 - 40,276,018 (-)NCBIRrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004842749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01025594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000017372   ⟹   ENSHGLP00000017199
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247462,124,160 - 2,141,567 (-)Ensembl
RefSeq Acc Id: XM_004842749   ⟹   XP_004842806
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247462,119,090 - 2,144,239 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004842806 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000017199
RefSeq Acc Id: XP_004842806   ⟸   XM_004842749
- UniProtKB: A0AAX6P3F3 (UniProtKB/TrEMBL),   G5BJF9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000017199   ⟸   ENSHGLT00000017372


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012315 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000017372 ENTREZGENE
InterPro DUF4597 UniProtKB/TrEMBL
KEGG Report hgl:101704882 UniProtKB/TrEMBL
NCBI Gene CUNH16orf74 ENTREZGENE
PANTHER GENE, 27021-RELATED UniProtKB/TrEMBL
  SIMILAR TO 1190005I06RIK PROTEIN UniProtKB/TrEMBL
Pfam DUF4597 UniProtKB/TrEMBL
UniProt A0AAX6P3F3 ENTREZGENE, UniProtKB/TrEMBL
  G5BJF9 ENTREZGENE, UniProtKB/TrEMBL