Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Coa8 | Rat | mitochondrial complex IV deficiency nuclear type 17 | | ISO | COA8 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Coa8 | Rat | mitochondrial complex IV deficiency nuclear type 17 | | ISO | COA8 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
3. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:12477932 | PMID:16782708 | PMID:18614015 | PMID:18977203 | PMID:25175347 | PMID:30552096 |
Coa8 (Rattus norvegicus - Norway rat) |
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COA8 (Homo sapiens - human) |
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Coa8 (Mus musculus - house mouse) |
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Apopt1 (Chinchilla lanigera - long-tailed chinchilla) |
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LOC100994669 (Pan paniscus - bonobo/pygmy chimpanzee) |
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COA8 (Canis lupus familiaris - dog) |
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APOPT1 (Sus scrofa - pig) |
No map positions available. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LOC103229762 (Chlorocebus sabaeus - green monkey) |
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Apopt1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Coa8
130 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH134587 |
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AA892746 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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15 | 11 | 56 | 144 | 125 | 120 | 77 | 31 | 77 | 12 | 277 | 122 | 112 | 55 | 79 | 43 |
RefSeq Transcripts | NM_001037769 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_017594513 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017603300 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063261787 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063261788 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063261789 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC131885 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC107661 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474034 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000006 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000015373 ⟹ ENSRNOP00000015373 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000091946 ⟹ ENSRNOP00000069759 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000103091 ⟹ ENSRNOP00000089878 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001037769 ⟹ NP_001032858 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063261787 ⟹ XP_063117857 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063261788 ⟹ XP_063117858 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063261789 ⟹ XP_063117859 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001032858 | (Get FASTA) | NCBI Sequence Viewer |
XP_063117857 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063117858 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063117859 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAI07662 | (Get FASTA) | NCBI Sequence Viewer |
EDL97453 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000015373.5 | ||
ENSRNOP00000069759.2 | |||
ENSRNOP00000089878.1 | |||
GenBank Protein | Q32Q90 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001032858 ⟸ NM_001037769 |
- UniProtKB: | Q32Q90 (UniProtKB/Swiss-Prot), A6KBS9 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000069759 ⟸ ENSRNOT00000091946 |
Ensembl Acc Id: | ENSRNOP00000015373 ⟸ ENSRNOT00000015373 |
Ensembl Acc Id: | ENSRNOP00000089878 ⟸ ENSRNOT00000103091 |
RefSeq Acc Id: | XP_063117857 ⟸ XM_063261787 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I6AB95 (UniProtKB/TrEMBL), A0A8L2R305 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063117859 ⟸ XM_063261789 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_063117858 ⟸ XM_063261788 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q32Q90-F1-model_v2 | AlphaFold | Q32Q90 | 1-193 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13694844 | ||||||||
Promoter ID: | EPDNEW_R5369 | ||||||||
Type: | initiation region | ||||||||
Name: | Apopt1_1 | ||||||||
Description: | apoptogenic 1, mitochondrial | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1304719 | AgrOrtholog |
BioCyc Gene | G2FUF-35828 | BioCyc |
Ensembl Genes | ENSRNOG00000011542 | Ensembl, UniProtKB/TrEMBL |
ENSRNOG00000058920 | Ensembl | |
Ensembl Transcript | ENSRNOT00000015373.7 | UniProtKB/TrEMBL |
ENSRNOT00000091946.2 | UniProtKB/TrEMBL | |
ENSRNOT00000103091.1 | UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7936717 | IMAGE-MGC_LOAD |
InterPro | APOPT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KEGG Report | rno:299341 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MGC_CLONE | MGC:124853 | IMAGE-MGC_LOAD |
NCBI Gene | 299341 | ENTREZGENE |
PANTHER | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 8 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR31107 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | DUF2315 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Coa8 | PhenoGen |
RatGTEx | ENSRNOG00000011542 | RatGTEx |
ENSRNOG00000058920 | RatGTEx | |
UniProt | A0A8I6AB95 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8L2Q7C7_RAT | UniProtKB/TrEMBL | |
A0A8L2R305 | ENTREZGENE, UniProtKB/TrEMBL | |
A6KBS9 | ENTREZGENE, UniProtKB/TrEMBL | |
APOP1_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2019-04-29 | Coa8 | cytochrome c oxidase assembly factor 8 | Apopt1 | apoptogenic 1, mitochondrial | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2012-07-13 | Apopt1 | apoptogenic 1, mitochondrial | Apopt1 | apoptogenic 1 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2011-09-29 | Apopt1 | apoptogenic 1 | RGD1304719 | similar to RIKEN cDNA 2810002N01 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-12-06 | RGD1304719 | similar to RIKEN cDNA 2810002N01 | RGD1304719_predicted | similar to RIKEN cDNA 2810002N01 (predicted) | Symbol and Name updated | 1559027 | APPROVED |
2005-01-20 | RGD1304719_predicted | similar to RIKEN cDNA 2810002N01 (predicted) | LOC299341_predicted | Symbol and Name status set to approved | 1331353 | APPROVED | |
2005-01-12 | LOC299341_predicted | similar to RIKEN cDNA 2810002N01 (predicted) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |