OR52N4G (olfactory receptor family 52 subfamily N member 4G) - Rat Genome Database

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Gene: OR52N4G (olfactory receptor family 52 subfamily N member 4G) Canis lupus familiaris
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Symbol: OR52N4G
Name: olfactory receptor family 52 subfamily N member 4G
RGD ID: 12059318
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC485295; olfactory receptor 52N4; olfactory receptor 52N4-like
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12128,877,868 - 28,878,964 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2128,877,993 - 28,878,964 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2128,639,198 - 28,640,294 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02129,697,386 - 29,698,482 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2129,697,511 - 29,698,482 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12129,020,436 - 29,021,532 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02129,210,342 - 29,211,438 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02129,371,515 - 29,372,595 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in OR52N4G
14 total Variants

Expression

RNA-SEQ Expression

reproductive system
8

Sequence


Ensembl Acc Id: ENSCAFT00000010199   ⟹   ENSCAFP00000009462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2128,877,993 - 28,878,964 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845010666   ⟹   ENSCAFP00845008315
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2129,697,511 - 29,698,482 (+)Ensembl
RefSeq Acc Id: XM_038429528   ⟹   XP_038285456
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02129,697,386 - 29,698,482 (+)NCBI
RefSeq Acc Id: XM_038506122   ⟹   XP_038362050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12129,020,436 - 29,021,532 (+)NCBI
RefSeq Acc Id: XM_038568116   ⟹   XP_038424044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02129,371,515 - 29,372,595 (+)NCBI
RefSeq Acc Id: XM_038632344   ⟹   XP_038488272
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02129,210,342 - 29,211,438 (+)NCBI
RefSeq Acc Id: XM_542413   ⟹   XP_542413
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12128,877,868 - 28,878,964 (+)NCBI
Dog10K_Boxer_Tasha2128,639,198 - 28,640,294 (+)NCBI
Sequence:
RefSeq Acc Id: XP_542413   ⟸   XM_542413
- UniProtKB: A0A8C0KAU5 (UniProtKB/TrEMBL),   A0A8I3RT12 (UniProtKB/TrEMBL),   A0A8P0SBP6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000009462   ⟸   ENSCAFT00000010199
RefSeq Acc Id: XP_038362050   ⟸   XM_038506122
RefSeq Acc Id: XP_038488272   ⟸   XM_038632344
RefSeq Acc Id: XP_038285456   ⟸   XM_038429528
- UniProtKB: A0A8C0KAU5 (UniProtKB/TrEMBL),   A0A8I3RT12 (UniProtKB/TrEMBL),   A0A8P0SBP6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038424044   ⟸   XM_038568116
- UniProtKB: A0A8C0KAU5 (UniProtKB/TrEMBL),   A0A8I3RT12 (UniProtKB/TrEMBL),   A0A8P0SBP6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845008315   ⟸   ENSCAFT00845010666
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000032254 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845006029 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000010199.3 UniProtKB/TrEMBL
  ENSCAFT00845010666 ENTREZGENE
  ENSCAFT00845010666.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_rcpt UniProtKB/TrEMBL
NCBI Gene LOC485295 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0KAU5 ENTREZGENE
  A0A8I3RT12 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SBP6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96660 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-04 OR52N4G  olfactory receptor family 52 subfamily N member 4G  LOC485295  olfactory receptor 52N4-like  Symbol and/or name change 5135510 APPROVED