Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Genes search result for All species
(View Results for all Objects and Ontologies)

17 records found for search term Setdb2
Refine Term:
Sort By:
           Export CSV TAB Print

RGD IDSymbolNameDescriptionChrStartStopSpeciesAnnotationsMatchType
1321179SETDB2SET domain bifurcated histone lysine methyltransferase 2This gene encodes a member of a family of proteins that contain a methyl-CpG-binding domain (MBD) and a SET domain and function as histone methyltransferases. This protein is recruited to heterochromatin and plays a role in the regulation of chromosome segregation. This region is commonly deleted in134944427449495003Human80symbol , old_gene_name , COSMIC , Human Proteome Mapgene, protein-coding, REVIEWED [RefSeq]
1614147Setdb2SET domain, bifurcated 2Predicted to enable histone H3K9 methyltransferase activity. Predicted to be involved in several processes, including heterochromatin organization; left/right pattern formation; and negative regulation of macromolecule biosynthetic process. Predicted to be located in cytosol and nucleoplasm. Predict145963945859678329Mouse97symbol , old_gene_name , PhenoGen , descriptiongene, protein-coding, VALIDATED [RefSeq]
2319564Setdb2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; gentamycin153773102937782790Rat77symbol , old_gene_name , PhenoGengene, protein-coding, MODEL [RefSeq]
8975019Setdb2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog)NW_00495543128998492943091Chinchilla6symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
12044353SETDB2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); chromatin remodeling (inferred); FOUND IN chromosome (inferred);133058476230635408Bonobo27symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
12124818SETDB2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); chromatin remodeling (inferred); FOUND IN chromosome (inferred);2222639902319249Dog29symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
18661826SETDB2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); chromatin remodeling (inferred); FOUND IN chromosome (inferred);Green Monkey27symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
14162766SETDB2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); chromatin remodeling (inferred); FOUND IN chromosome (inferred);Pig27symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
625869100Setdb2SET domain bifurcated histone lysine methyltransferase 2ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog)Black Rat6symbol , old_gene_namegene, protein-coding, MODEL [RefSeq]
155239607setdb2Tropical Clawed Frogsymbolgene, null
155239608setdb2.SAfrican Clawed Frogsymbolgene, null
2323619Setdb2-ps1SET domain bifurcated histone lysine methyltransferase 2, pseudogene 1204216682242168114Ratsymbol , PhenoGengene, pseudo, MODEL [RefSeq]
38616362SETDB2-PHF11SETDB2-PHF11 readthroughThis gene represents naturally-occurring readthrough transcription between the upstream SETDB2 (SET domain bifurcated 2) gene to the downstream PHF11 (PHD finger protein 11) gene. Readthrough transcripts may encode fusion proteins with similarity to proteins enc134944427449528976Humansymbol , GTEx , old_gene_name , COSMIC , name , description , Human Proteome Mapgene, protein-coding, VALIDATED [RefSeq]
18913752LOC101696702histone-lysine N-methyltransferase SETDB2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); heterochromatin organization (inferred); FOUND IN chromosome (inNaked Mole-Rat25ensembl_gene_symbol , name , old_gene_symbolgene, protein-coding, MODEL [RefSeq]
12527229LOC101978403histone-lysine N-methyltransferase SETDB2ENCODES a protein that exhibits DNA binding (inferred); histone H3K9 methyltransferase activity (inferred); histone H3K9me2 methyltransferase activity (inferred); INVOLVED IN cell division (inferred); chromatin organization (inferred); chromosome segregation (inferred); FOUND IN chromosome (inferredNW_00493656525366232607824Squirrel30old_gene_name , name , old_gene_symbolgene, protein-coding, MODEL [RefSeq]
12795927Gm45935predicted gene, 45935This gene represents naturally-occurring readthrough transcription between the upstream Setdb2 (SET domain, bifurcated 2) gene to the downstream Phf11c (PHD finger protein 11C) gene. Some transcripts may also extend to the Phf11d (PHD finger protein 11D) gene. R145961828259678329Mouseold_gene_name , description , old_gene_symbolgene, protein-coding, VALIDATED [RefSeq]
1321995PHF11PHD finger protein 11This gene encodes a protein containing a PHD (plant homeodomain) type zinc finger. This gene has been identified in some studies as a candidate gene for asthma. Naturally-occurring readthrough transcription may occur from the upstream SETDB2 (SET domain bifurcat134949595349528976Human109descriptiongene, protein-coding, REVIEWED [RefSeq]