| 1307584 | Hoxc5 | homeo box C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (ortholog); INTERACTS WITH 1,2-dimethylhydrazine; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine | 7 | 136029454 | 136032876 | Rat | 67 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1316862 | Hoxc5 | homeobox C5 | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within anterior/posterior pattern specification and embryonic skeletal system development. Predicted to be located in cell junction and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; central nervous system; embryo mesenchyme; genitourinary system; and respiratory system. Orthologous to human HOXC5 (homeobox C5). [provided by Alliance of Genome Resources, Jul 2025] | 15 | 102922440 | 102925861 | Mouse | 80 | symbol , PhenoGen , description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1344989 | HOXC5 | homeobox C5 | This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are locat ed on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC5, is one of several homeobox HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Two alternatively spliced variants have been described for HOXC5. The transcript variant which includes the shared exon apparently doesn't encode a protein. The protein-coding transcript variant contains gene-specific exons only. [provided by RefSeq, Jul 2008] | 12 | 54016888 | 54035361 | Human | 66 | symbol , COSMIC , description , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 8823679 | Hoxc5 | homeobox C5 | INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog) | NW_004955458 | 1288411 | 1293095 | Chinchilla | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11870229 | HOXC5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | 12 | 34720006 | 34722202 | Bonobo | 20 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12111395 | HOXC5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | 27 | 1227739 | 1232802 | Dog | 20 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12718474 | Hoxc5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | NW_004936512 | 11254959 | 11258702 | Squirrel | 21 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18903157 | Hoxc5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | | | | Naked Mole-Rat | 21 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18713731 | HOXC5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | | | | Green Monkey | 19 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14051804 | HOXC5 | homeobox C5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (orth olog); FOUND IN nucleoplasm (inferred); nucleus (inferred) | | | | Pig | 20 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 625948644 | Hoxc5 | homeobox C5 | INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog) | | | | Black Rat | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155242197 | hoxc5 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 155242196 | hoxc5.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405862732 | hoxc5.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405858385 | hoxc5.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405861191 | hoxc5.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 626173338 | hoxc5.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405857869 | hoxc5.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 16566676 | AC012531.3 | novel protein, readthrough between HOXC10 and HOXC5 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN DNA-templated transcription (inferred); regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferr ed); FOUND IN nucleus (inferred) | | | | Human | 9 | name | gene, protein-coding |
| 1351931 | HOXC4 | homeobox C4 | This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are locat ed on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC4, is one of several homeobox HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Two alternatively spliced variants that encode the same protein have been described for HOXC4. Transcript variant one includes the shared exon, and transcript variant two includes only gene-specific exons. [provided by RefSeq, Jul 2008] | 12 | 54016888 | 54056030 | Human | 91 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 1348360 | HOXC6 | homeobox C6 | This gene belongs to the homeobox family, members of which encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on diffe rent chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC6, is one of several HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Alternatively spliced transcript variants encoding different isoforms have been identified for HOXC6. Transcript variant two includes the shared exon, and transcript variant one includes only gene-specific exons. [provided by RefSeq, Jul 2008] | 12 | 54016888 | 54030823 | Human | 84 | description | gene, protein-coding, REVIEWED [RefSeq] |
