| 2619 | Foxg1 | forkhead box G1 | ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron developmen t (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH bisphenol A; Cuprizon; dexamethasone | 6 | 72401582 | 72404392 | Rat | 143 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 10591 | Foxg1 | forkhead box G1 | Enables sequence-specific DNA binding activity. Acts upstream of or within several processes, including neuron differentiation; positive regulation of neuroblast proliferation; and regulation of neuron differentiation. Located in nucleus. Is expressed in several structures, including central nervous system; early embryo; embryo ectoderm; gonad; and sensory organ. Used to study Rett syndrome. Orthologous to human FOXG1 (forkhead box G1). [provided by Alliance of Genome Resources, Jul 2025] | 12 | 49429666 | 49433650 | Mouse | 503 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 737514 | FOXG1 | forkhead box G1 | This locus encodes a member of the fork-head transcription factor family. The encoded protein, which functions as a transcriptional repressor, is highly expressed in neural tissues during brain development. Mutations at this locus have been associated with Rett syndrome and a diverse spectrum of neu rodevelopmental disorders defined as part of the FOXG1 syndrome. This gene is disregulated in many types of cancer and is the target of multiple microRNAs that regulate the proliferation of tumor cells. [provided by RefSeq, Jul 2020] | 14 | 28766787 | 28770277 | Human | 382 | symbol , COSMIC , description , Human Proteome Map , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 8857645 | Foxg1 | forkhead box G1 | ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron developmen t (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (ortholog) | NW_004955409 | 31672960 | 31674970 | Chinchilla | 47 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12162460 | FOXG1 | forkhead box G1 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous syst em neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (inferred) | 8 | 8276300 | 8279785 | Dog | 56 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12644891 | Foxg1 | forkhead box G1 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous syst em neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (inferred) | NW_004936494 | 3738419 | 3740419 | Squirrel | 59 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13931146 | FOXG1 | forkhead box G1 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous syst em neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (inferred) | | | | Pig | 59 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 286734629 | foxg1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 39131481 | FOXG1 | forkhead box G1 | | | | | Chinchilla | | symbol | gene, protein-coding |
| 329347111 | FOXG1 | forkhead box G1 | ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog) | | | | Bonobo | 19 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 626083199 | Foxg1 | forkhead box G1 | ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron developmen t (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (ortholog) | | | | Black Rat | 47 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 598130445 | FOXG1 | forkhead box G1 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous syst em neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (inferred) | | | | Green Monkey | 59 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18914024 | Foxg1 | forkhead box G1 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous syst em neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); congenital variant of Rett syndrome (ortholog); FOUND IN nucleus (inferred) | | | | Naked Mole-Rat | 56 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 288080660 | foxg1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 285003034 | foxg1.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 8699126 | FOXG1-AS1 | FOXG1 antisense RNA 1 | INTERACTS WITH sodium arsenite | 14 | 28725242 | 28765319 | Human | 1 | symbol , old_gene_name , COSMIC , name , Human Proteome Map , old_gene_symbol | gene, ncrna, VALIDATED [RefSeq] |
| 11920095 | LOC100990531 | uncharacterized LOC100990531 | ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH Rett syndrome (ortholog); FO UND IN nucleus (ortholog) | 14 | 9545147 | 9572309 | Bonobo | 29 | old_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 38508915 | AL049777.1 | FOXG1-C14orf23 readthrough | | | | | Human | | name | gene, lncrna |
