RGD:63692120 Rat Genome Database

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Variant: RGD:63692120 -  Rattus norvegicus

RGD ID: 63692120
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Gabbr1  
Reference Nucleotide: G
Variant Nucleotide: T
Position
Assembly Chr Position
RGSC_v3.4 20 1,572,407
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Gabbr1
Accession:NM_031028
Location:EXON
Amino Acid Prediction: T to K (nonsynonymous)
Amino Acid Position: 368
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
probably damaging alignment   NO -1.669 -3.573 +1.904 297   NP_112290   -
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MLLLLLVPLFLRPLGAGGAQTPNATSEGCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVVGPKVRKC
LANGSWTDMDTPSRCVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQGQWSTPKPHCQVNR
TPHSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKII
LMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTS
TLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYEKEARKVFCEVYKERLFGKKYVWFLIGWYADNWF
KTYDPSINCTVEEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALAL
NKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLS
WSKTDKWIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLAL
AAVFPLGLDGYHIGRSQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMD
VLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSKKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKIND
HRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSETQDTMKTGSSTN
NNEEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPDPSGGLPRGPSEPPDRLSCDGSRVHLLYK
*
SS/JrHsdMcwi (MCW)