RGD:63657570 Rat Genome Database

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Variant: RGD:63657570 -  Rattus norvegicus

RGD ID: 63657570
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Slc12a3  
Reference Nucleotide: C
Variant Nucleotide: A
Position
Assembly Chr Position
RGSC_v3.4 19 11,091,209
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Slc12a3
Accession:NM_019345
Location:EXON
Amino Acid Prediction: V to F (nonsynonymous)
Amino Acid Position: 710
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment   NO -1.562 -3.765 +2.203 361   NP_062218   -
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MAELPVTEMPGDALCSGRFTISTLLGGDEPPPAACDNSQPSHLTHGSTLYLRTFGYNTIDVVPAYEHYANSALPGEPRKV
RPTLADLHSFLKQEGSHLHALAFDGRPGHELTDGLVEDETGANSEKSPGEPVRFGWVKGVMIRCMLNIWGVILYLRLPWI
TAQAGIVLTWLIILLSVMVTSITGLSISAISTNGKVKSGGTYFLISRSLGPELGGSIGLIFAFANAVGVAMHTVGFAETV
RDLLQENGTPIVDPINDIRIIGVVTVTVLLAISLAGMEWESKAQVLFFLVIMVSFANYLVGTLIPASKDKASKGFYSYHG
DIFVQNLVPDWRGIDGSFFGMFSIFFPSATGILAGANISGDLKDPAVAIPKGTLMAIFWTTISYLAISATIGSCVVRDAS
GDVNDTVTPGPGLCEGLACGYGWNFTECSQQHSCRYGLINYYQTMSMVSAFAPLITAGIFGATLSSALACLVSAAKVFQC
LCEDQLYPLIGFFGKGYGKNKEPVRGYLLAYAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSF
RYYSKWAALFGAVISVVIMFLLTWWAALIAIGVVLFLLLYVIYKKPEVNWGSSVQAGSYNLALSYSVGLNEVEDHIKNYR
PQCLVLTGPPNFRPALVDFVSTFTQNLSLMICGHVLIAPGKQRVPELRLIASGHTKWLNKRKIKAFYSDFIAEDLRSGVQ
ILMQASGLGRMKPNILVVGFKKNWQSAHPATLEDYIGILHDAFDFNYGVCIMRMREGLNVSEALQTHTAPEALVQEEQTS
TIFQSEQGKKTIDIYWLFDDGGLTLLIPYLLHRKKRWGKCKIRVFVGGQINRMDEERKAIISLLSKFRLGFHEVHVLPDI
NQKPQVEHTKRFEDMIAPFRLNDGFKDEATVAEMRRDYPWKISDEEINKNRIKSLRQVRLNEILLDYSRDAALIILTLPI
GRKGKCPSSLYMAWLETLSQDLSPPVLLIRGNQENVLTFYCQ*
SS/JrHsdMcwi (MCW)