RGD:46912882 Rat Genome Database

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Variant: RGD:46912882 -  Rattus norvegicus

RGD ID: 46912882
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Disc1  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
Rnor_5.0 19 68,573,349
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Disc1
Accession:NM_175596
Location:EXON
Amino Acid Prediction: A to V (nonsynonymous)
Amino Acid Position: 65
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment     -1.945 -3.640 +1.695 416   NP_783186   +
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MQGAGSRGAWIHSPSHCPGNGHGSPPAVAPQRRRLTRRPGYMRSTASPGIGFLSPAVGMPRPISVGLTGQEFYPSQSKAR
QCSLDLRSHCQDSLVGNPFLKGSLGPAVTSVGHLHPAQGSMRERMVHSGVHSGNDRRQSERLTGDSGCRQEFLSSDSSKS
LASSLDVAWSKGSRGLKTVRPLVSPASNGPVDIPSLPGFQDTFTSNFSFIRLSLGAAGERGEAEGCLPSREAEPLHQSPQ
EMAAEGSGSDRPHGEPRHLWTFSLHAAPGLVDLAQGTRSNRQPECGMVSSSDAGFSSQDASPAGGRSDQDGGWADAHGWH
ALLREWEPMLQDYLLSNRRQLEVTSLILKLQKLQEKAVEDGDYDMAETLRQRLEDLEQEKGRLPWALPSQQPALRSFLGY
LATQTHAALHGAPQRAGSDDPEAPLEGQRRTTAQDSLPGLAVTRRDWLMREKEQLQKEIEALRARVSVLEAKEQRLSQEL
EDQEMLLRWQGCDQMALVAQLSPGQLQEVSKALGETLTSARWAPFRVEPPETLRSLRERTKSLDLAVRELTEQVCSGEKL
CSSLRKRLADLDTRLPALLEAKMLALSGSCFSTAKELAEEIWAVSSEREGLEMFLGRLLALSSRNTRRLGSVKEDYLRCR
QDLALQEAAHKTRVKANTVKCTEVLEGQLSCCRCPLLERVWKADLEACQLLMQSLEIQEAGSSSHVEDEKQVHSTGEAAQ
TAALAVPRTPHPEEEKSPLQESHVVFAEVGDKCEAIGMRLLHLEDQLLGAMHGHDEALFQSLQGELQMVKETLQTMFLQL
QPAKEAGGEASASYSTAGAQEAED*
HWY/Slc (KyushuU)