RGD:46199051 Rat Genome Database

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Variant: RGD:46199051 -  Rattus norvegicus

RGD ID: 46199051
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Setsip  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
Rnor_5.0 19 69,120,071
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Setsip
Accession:NM_001012504
Location:EXON
Amino Acid Prediction: H to L (nonsynonymous)
Amino Acid Position: 117
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment   NO -1.394 -2.556 +1.162 448   NP_001012522   +
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MAPKRQSAILPQPKKPRPVAAPKLEDKSASPGLPKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFF
QKRSELITKIPNFWVTTFVNHPQVSALLGEEDEEALLYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNES
GDPSSKSTEIKWKSGKDLTKCSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDE
EGEAEDDDDDDEEEEGLEDIDEEGDEDEGEEDNDEDEGEEGEEDEGEDD*