rs105013744 Rat Genome Database

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Variant: rs105013744 -  Rattus norvegicus

RGD ID: 145277559
RS ID: rs105013744
Associated ss Id(s): ss11832527650
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Dmkn  
Reference Nucleotide: A
Variant Nucleotide: C
Position
Assembly Chr Position
mRatBN7.2 1 86,016,744
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Dmkn
Accession:NM_001173357
Location:EXON
Amino Acid Prediction: E to A (nonsynonymous)
Amino Acid Position: 282
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment   NO -1.404 -2.759 +1.355 13   NP_001166828   +
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MKPQGSLACLLLALCLGSGVANPLHSGGEGTGANAAPGMGGTISHGIGESVGQGAKEAASSGIQDALGQGHGEGGYALMG
GRGDVFDHQLGEAARSLENAGNEIGRRAEDVIRRGVDAAHNSGSWGTSGGHGVYGSQGGFGSQGNPGVEGTPWASGGNYG
TNSLGGSVGQGGSGRPLNYETNAQGAVAQPGYGAVRGNNQNSGCTNPPPSDSHESFSDSGGSSNGGSHGGQGNQGSNGQG
NSGGNSGQGSSGSSGNSGNNEGSGGHSGNSGGNSGSGSRDLATSNFDDGYSVSRGTSSSSGSRGGSGGGGNRPECNNPGN
DVRMAGGSGSQESKESSHLLGGSHDYQGHGSGHGSNGGNVQRDAVSGLNTMNSDASSLPFNLDNFWENFKSKMGFINWDA
INKGRGPAPSTRALLYFRRLWENFKRNTPFFNWKQIEGSDLSSLQKRAGGADQFSQPEAARQDLSAESAKNYYNNAQVNP
TYNWQYYTKTTPKAGVTPSSSASRAQPGLLKWLKFW*

Gene Symbol:Dmkn
Accession:XM_039081975
Location:EXON
Amino Acid Prediction: E to A (nonsynonymous)
Amino Acid Position: 282
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MKPQGSLACLLLALCLGSGVANPLHSGGEGTGANAAPGMGGTISHGIGESVGQGAKEAASSGIQDALGQGHGEGGYALMG
GRGDVFDHQLGEAARSLENAGNEIGRRAEDVIRRGVDAAHNSGSWGTSGGHGVYGSQGGFGSQGNPGVEGTPWASGGNYG
TNSLGGSVGQGGSGRPLNYETNAQGAVAQPGYGAVRGNNQNSGCTNPPPSDSHESFSDSGGSSNGGSHGGQGNQGSNGQG
NSGGNSGQGSSGSSGNSGNNEGSGGHSGNSGGNSGSGSRDLATSNFDDGYSVSRGTSSSSGSRGGSGGGGNRPECNNPGN
DVRMAGGSGSQGHGSGHGSNGGNVQRDAVSGLNTMNSDASSLPFNLDNFWENFKSKMGFINWDAINKGRGPAPSTRALLY
FRRLWENFKRNTPFFNWKQIEGSDLSSLQKRAGGADQFSQPEAARQDLSAESAKNYYNNAQVNPTYNWQYYTKTTPKAGV
TPSSSASRAQPGLLKWLKFW*

Gene Symbol:Dmkn
Accession:XM_039081986
Location:INTRON

FHH/EurMcwi (2019NG) FHH/EurMcwi (2019) LH/MavRrrcAek (2020) LL/MavRrrcAek (2020) LN/MavRrrcAek (2020)