RGD:126243854 Rat Genome Database

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Variant: RGD:126243854 -  Rattus norvegicus

RGD ID: 126243854
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Pilrb-ps1  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
Rnor_6.0 12 21,669,544
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Pilrb-ps1
Accession:XM_008769104
Location:EXON
Amino Acid Prediction: W to R (nonsynonymous)
Amino Acid Position: 133
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment     -1.490 -3.806 +2.316 75   XP_008767326   -
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNST
QPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSRQSIPGTQLIIHALNTTIESPSIIPFAV
PSAGLEDTRDQRNPSLLNLGVMVGMVMAKVVVIMPLCGWMIFLWWKQRPAE*
MR/N (MCW)