RGD:405854222 Rat Genome Database

RGD:405854222 Rat Genome Database

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Variant: RGD:405854222 - Homo sapiens

RGD ID:

405854222

ClinVar ID:

CV3393836

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

Reference Nucleotide:

A

Variant Nucleotide:

G

Position

Assembly	Chr	Position
GRCh37	14	90,870,755
GRCh38	14	90,404,411

JBrowse:

View Region in Genome Browser (JBrowse)

Model

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NC_000014.9:g.90404411A>G NC_000014.8:g.90870755A>G NP_008819.1:p.Leu106= NP_001350599.1:p.Leu107= More...	04/01/2024	synonymous variant	likely benign	none provided; RECLASSIFIED - ADRA2C POLYMORPHISM; RECLASSIFIED - ADRB1 POLYMORPHISM

Gene Symbol:	CALM1
Accession:	NM_006888
Location:	EXON
Amino Acid Prediction:	L to L (synonymous)
Amino Acid Position:	106

Amino Acid Sequence (Calculated using NCBI transcript definition)
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK*

Gene Symbol:	CALM1
Accession:	NM_001363669
Location:	EXON
Amino Acid Prediction:	L to L (synonymous)
Amino Acid Position:	70

Amino Acid Sequence (Calculated using NCBI transcript definition)
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK LTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK*

Gene Symbol:	CALM1
Accession:	NM_001363670
Location:	EXON
Amino Acid Prediction:	L to L (synonymous)
Amino Acid Position:	107

Amino Acid Sequence (Calculated using NCBI transcript definition)
MQADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK*

ClinVar GRCh37	ClinVar GRCh38

Database	Acc Id	Source(s)
ClinVar	RCV004547062	CLINVAR
MedGen	C3661900	CLINVAR
NCBI Gene	CALM1	CLINVAR
OMIM	114180	CLINVAR