RGD:405052196 Rat Genome Database

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Variant: RGD:405052196 -  Homo sapiens

RGD ID: 405052196
ClinVar ID: CV3048987
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LDLR  MIR6886  
Reference Nucleotide: C
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 19 11,224,198
GRCh38 19 11,113,522
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001195799.2:c.1236-13C>A
NM_000527.5:c.1359-13C>A
NM_001195798.2:c.1359-13C>A
NM_001195800.2:c.855-13C>A
More... 		08/11/2023 intron variant likely benign
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:MIR6886
Accession:NR_106946
Location:EXON;NON-CODING

Gene Symbol:LDLR
Accession:NM_001195803
Location:INTRON

Gene Symbol:LDLR
Accession:NM_001195800
Location:INTRON

Gene Symbol:LDLR
Accession:XM_011528010
Location:INTRON

Gene Symbol:LDLR
Accession:NM_001406861
Location:INTRON

Gene Symbol:LDLR
Accession:NM_000527
Location:INTRON

Gene Symbol:LDLR
Accession:NM_001195798
Location:INTRON

Gene Symbol:LDLR
Accession:NM_001195799
Location:INTRON

Gene Symbol:LDLR
Accession:XM_047438831
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV003740710 CLINVAR
MedGen C0020445 CLINVAR
NCBI Gene LDLR CLINVAR
  MIR6886 CLINVAR
OMIM 606945 CLINVAR
SNOMED CT 398036000 CLINVAR