RGD:401905920 Rat Genome Database

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Variant: RGD:401905920 -  Homo sapiens

RGD ID: 401905920
ClinVar ID: CV2810161
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LOC126861440  NECAP1  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 12 8,234,968
GRCh38 12 8,082,372
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_015509.4:c.84C>T
NG_034155.2:g.5100C>T
NG_034155.1:g.5162C>T
NG_085939.1:g.937C>T
More... 		09/01/2022 non-coding transcript variant likely benign none provided

Variant Details
Variant Transcripts
Gene Symbol:NECAP1
Accession:NM_015509
Location:EXON
Amino Acid Prediction: N to N (synonymous)
Amino Acid Position: 28
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MATELEYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGI
AVETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIK
LCIGNITNKKGGASKPRTARGGGLSLLPPPPGGKVTIPPPSSSVAISNHVTPPPIPKSNHGGSDADILLDLDSPAPVTTP
APTPVSVSNDLWGDFSTASSSVPNQAPQPSNWVQF*

Gene Symbol:NECAP1
Accession:NR_024260
Location:EXON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV003396199 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene LOC126861440 CLINVAR
  NECAP1 CLINVAR
OMIM 611623 CLINVAR