RGD:28890660 Rat Genome Database

Variant: RGD:28890660 - Homo sapiens

RGD ID:

28890660

RS ID:

rs1271395440

ClinVar ID:

CV903573

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

ADK

Reference Nucleotide:

Variant Nucleotide:

Position

Assembly	Chr	Position
GRCh37	10	75,960,527
GRCh38	10	74,200,769

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

ClinVar Data

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NC_000010.10:g.75960527A>T NP_001189379.1:p.Asn24Ile NP_001356052.1:p.Asn24Ile NP_006712.2:p.Asn24Ile More...	05/03/2020	missense variant	uncertain significance	Hypermethioninemia due to adenosine kinase deficiency; MENTAL RETARDATION, AUTOSOMAL RECESSIVE 8

Disease Annotations Click to see Annotation Detail View

hypermethioninemia due to adenosine kinase deficiency (IAGP)

Variant Details

Variant Transcripts

Gene Symbol:	ADK
Accession:	XM_017015702
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFEKVK SLLLLSWIKTRKKLLIPMELEMHLLEVFCLNWSLTSL*

Gene Symbol:	ADK
Accession:	NM_006721
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGN ETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFV GGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH*

Gene Symbol:	ADK
Accession:	NM_001202449
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEI LKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPES VLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKR QRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTF PEKPDFH*

Gene Symbol:	ADK
Accession:	XM_017015698
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGN ETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATGRIKRKEDKWAQWLTPVTLAPWEVKVGG LLDPRSWRPALVTARLHLYKKKWKKKKN*

Gene Symbol:	ADK
Accession:	NM_001369123
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGN ETEAATFAREQGFEKVKSLLLLSWIKTRKKLLIPMELEMHLLEVFCLNWSLTSL*

Gene Symbol:	ADK
Accession:	XM_047424620
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATGRIKRKEDKWAQWLTPVTLAPWEVKVGGLLDPRSWRPALVTARLH LYKKKWKKKKN*

Gene Symbol:	ADK
Accession:	NM_001202450
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVT AFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH*

Gene Symbol:	ADK
Accession:	XM_017015705
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAEAATFAREQGFEKVKSLLLLSWIKTRKKLLIPMELEMHLLEVFCLNWSLTSL*

Gene Symbol:	ADK
Accession:	NM_001123
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECI RAGHYAASIIIRRTGCTFPEKPDFH*

Gene Symbol:	ADK
Accession:	XM_017015704
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	24

Amino Acid Sequence (Calculated using NCBI transcript definition)
MAAAEEEPKPKKLKVEAPQALREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANC YKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGN ETTYHI*

Gene Symbol:	ADK
Accession:	XM_047424621
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAEAATFAREQGFEKVKSLLLLSWIKTRKKLLIPMELEMHLLEVFCLNWSLTSL*

Gene Symbol:	ADK
Accession:	XM_017015706
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETTYHI*

Gene Symbol:	ADK
Accession:	NM_001369124
Location:	EXON
Amino Acid Prediction:	N to I (nonsynonymous)
Amino Acid Position:	7

Amino Acid Sequence (Calculated using NCBI transcript definition)
MTSVREIILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQP HKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVE KARVCYIAEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNG AGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH*

Gene Symbol:	ADK
Accession:	XM_017015703
Location:	INTRON

Gene Symbol:	ADK
Accession:	XM_017015699
Location:	INTRON

Variant Samples

ClinVar GRCh37

ClinVar GRCh38

Additional References at PubMed

PMID:25741868

Additional Information

External Database Links

Database	Acc Id	Source(s)
ClinVar	RCV001170034	CLINVAR
dbSNP (RS)	rs1271395440	CLINVAR
MedGen	C4706555	CLINVAR
NCBI Gene	ADK	CLINVAR
OMIM	102750	CLINVAR
	611094	CLINVAR
	614300	CLINVAR

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Variant: RGD:28890660 - Homo sapiens

Imported Disease Annotations - ClinVar