RGD:156412260 Rat Genome Database

RGD:156412260 Rat Genome Database

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Variant: RGD:156412260 - Homo sapiens

RGD ID:

156412260

ClinVar ID:

CV1890453

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

Reference Nucleotide:

G

Variant Nucleotide:

A

Position

Assembly	Chr	Position
GRCh37	7	103,029,861
GRCh38	7	103,389,414

JBrowse:

View Region in Genome Browser (JBrowse)

Model

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NM_001167962.2:c.1312-300C>T NM_001321787.2:c.1312-300C>T NM_198999.3:c.1322C>T NM_206883.3:c.1322C>T More...	05/23/2023	intron variant	uncertain significance	none provided; RECLASSIFIED - ADRA2C POLYMORPHISM; RECLASSIFIED - ADRB1 POLYMORPHISM

Gene Symbol:	SLC26A5
Accession:	NM_206883
Location:	EXON
Amino Acid Prediction:	S to L (nonsynonymous)
Amino Acid Position:	441

Amino Acid Sequence (Calculated using NCBI transcript definition)
MDHAEENEILAATQRYYVERPIFSHPVLQERLHTKDKVPDSIADKLKQAFTCTPKKIRNIIYMFLPITKWLPAYKFKEYV LGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPG GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGI FSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVGT LPLGLLPPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRS LVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLLAIVIVNLKGMFMQFSDLPFFWRTSKIELTIWLTTFVSSL FLGLDYGLITAVIIALLTVIYRTQSPSYKVLGKLPETDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALKRKT GVNPAVIMGARRKAMRKYAKEVGNANMANATVVKADAEVDGEDATKPEEEDGEVKYPPIVIKSTFPEEMQRFMPPGDNVH TVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAFIQR*

Gene Symbol:	SLC26A5
Accession:	NM_206884
Location:	EXON
Amino Acid Prediction:	S to L (nonsynonymous)
Amino Acid Position:	441

Amino Acid Sequence (Calculated using NCBI transcript definition)
MDHAEENEILAATQRYYVERPIFSHPVLQERLHTKDKVPDSIADKLKQAFTCTPKKIRNIIYMFLPITKWLPAYKFKEYV LGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPG GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGI FSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVGT LPLGLLPPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRS LVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLLAIVIVNLKGMFMQFSDLPFFWRTSKIELTIWLTTFVSSL FLGLDYGLITAVIIALLTVIYRTQSFHTEMTRRWRP*

Gene Symbol:	SLC26A5
Accession:	NM_198999
Location:	EXON
Amino Acid Prediction:	S to L (nonsynonymous)
Amino Acid Position:	441

Amino Acid Sequence (Calculated using NCBI transcript definition)
MDHAEENEILAATQRYYVERPIFSHPVLQERLHTKDKVPDSIADKLKQAFTCTPKKIRNIIYMFLPITKWLPAYKFKEYV LGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPG GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGI FSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVGT LPLGLLPPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRS LVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLLAIVIVNLKGMFMQFSDLPFFWRTSKIELTIWLTTFVSSL FLGLDYGLITAVIIALLTVIYRTQSPSYKVLGKLPETDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALKRKT GVNPAVIMGARRKAMRKYAKEVGNANMANATVVKADAEVDGEDATKPEEEDGEVKYPPIVIKSTFPEEMQRFMPPGDNVH TVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTRNRFFENPALWELLFHSIHDAVLGSQLREALA EQEASAPPSQEDLEPNATPATPEA*

Gene Symbol:	SLC26A5
Accession:	XM_011516170
Location:	EXON
Amino Acid Prediction:	S to L (nonsynonymous)
Amino Acid Position:	441

Amino Acid Sequence (Calculated using NCBI transcript definition)
MDHAEENEILAATQRYYVERPIFSHPVLQERLHTKDKVPDSIADKLKQAFTCTPKKIRNIIYMFLPITKWLPAYKFKEYV LGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPG GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGI FSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVGT LPLGLLPPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRS LVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLLAIVIVNLKGMFMQFSDLPFFWRTSKIELTIWLTTFVSSL FLGLDYGLITAVIIALLTVIYRTQSPSYKVLGKLPETDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSNALKRKT GVNPAVIMGARRKAMRKYAKEVGNANMANATVVKADAEVDGEDATKPEEEDGEVKYPPIVIKSTFPEEMQRFMPPGDNVH TVILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTRNRFFENPALWELLFHSIHDAVLGSQLREALA EQEASAPPSQEDLEPNATPATPEA*

Gene Symbol:	SLC26A5
Accession:	XM_047420347
Location:	EXON
Amino Acid Prediction:	S to L (nonsynonymous)
Amino Acid Position:	441

Amino Acid Sequence (Calculated using NCBI transcript definition)
MDHAEENEILAATQRYYVERPIFSHPVLQERLHTKDKVPDSIADKLKQAFTCTPKKIRNIIYMFLPITKWLPAYKFKEYV LGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPG GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGI FSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLKESYNVDVVGT LPLGLLPPANPDTSLFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFSISCSLSRS LVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLLAIVIVNLKGMFMQFSDLPFFWRTSKIELTIWLTTFVSSL FLGLDYGLITAVIIALLTVIYRTQR*

Gene Symbol:	SLC26A5
Accession:	NR_120442
Location:	EXON;NON-CODING

Gene Symbol:	SLC26A5
Accession:	XR_007060034
Location:	EXON;NON-CODING

Gene Symbol:	SLC26A5
Accession:	NM_206885
Location:	INTRON

Gene Symbol:	SLC26A5
Accession:	NM_001167962
Location:	INTRON

Gene Symbol:	SLC26A5
Accession:	NM_001321787
Location:	INTRON

Gene Symbol:	SLC26A5
Accession:	NR_120443
Location:	INTRON;NON-CODING

Gene Symbol:	SLC26A5
Accession:	NR_120441
Location:	INTRON;NON-CODING

Gene Symbol:	SLC26A5
Accession:	NR_135802
Location:	INTRON;NON-CODING

Gene Symbol:	SLC26A5
Accession:	NR_135801
Location:	INTRON;NON-CODING

ClinVar GRCh37	ClinVar GRCh38

PMID:28492532	PMID:30622556

Database	Acc Id	Source(s)
ClinVar	RCV003072819	CLINVAR
MedGen	C3661900	CLINVAR
NCBI Gene	SLC26A5	CLINVAR
OMIM	604943	CLINVAR