RGD:155906271 Rat Genome Database

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Variant: RGD:155906271 -  Homo sapiens

RGD ID: 155906271
ClinVar ID: CV2357288
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: KRTAP10-4  TSPEAR  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 21 45,993,673
GRCh38 21 44,573,796
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001272037.2:c.-122-5791C>T
NM_198687.2:c.38G>A
NM_144991.3:c.83-5791C>T
NG_033806.2:g.142776C>T
More... 		08/02/2021 intron variant uncertain significance AllHighlyPenetrant

Variant Details
Variant Transcripts
Gene Symbol:TSPEAR
Accession:NM_001272037
Location:5UTRS;INTRON

Gene Symbol:KRTAP10-4
Accession:NM_198687
Location:EXON
Amino Acid Prediction: R to H (nonsynonymous)
Amino Acid Position: 13
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSVCSSDLSYSSHVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPSCCAPAPCLSLVCTPVSRVSSPCCPVTCEPSPCQSG
CTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKPVCCVPVCCGDSSCCQQSSCQSACCTSSPCQQACCVPIC
CKPVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCKTVCCK
PVCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVCSVPICSGASSLCCQQSSCQPACCTSSQSQQGCCVP
VCCKPVSCVPVCSGASSSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQPSCCRPASCVSL
L*

Gene Symbol:TSPEAR
Accession:NM_144991
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV004200185 CLINVAR
MedGen CN169374 CLINVAR
NCBI Gene KRTAP10-4 CLINVAR
  TSPEAR CLINVAR
OMIM 612920 CLINVAR