rs1194538397 Rat Genome Database
Welcome
Sign In
Message Center
1 Messages
Go to Message Center
Watched Genes
Watched Ontology Terms
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
Subscribe to Updates
Select categories you would like to watch. Updates to this gene will be sent to Sign In
Analyze List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailable
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants)
unavailable
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
Summary
Annotation
ClinVar Data
Imported Disease - ClinVar
Variant Details
Variant Samples
PubMed References
Additional Information
External Database Links
Variant: rs1194538397 - Homo sapiens
RGD ID:
152081416
RS ID:
rs1194538397
ClinVar ID:
CV1645074
Genic Status:
GENIC
Type:
insertion
(SO:0000667)
Associated Genes:
ACTC1
GJD2-DT
Reference Nucleotide:
-
Variant Nucleotide:
ACAT
Position
Assembly
Chr
Position
GRCh37
15
35,083,516
GRCh38
15
34,791,315
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
ClinVar Data
HGVS Name(s)
Last Evaluated
Molecular Consequence
Clinical Significance
Trait Synonyms
NM_005159.5:c.809-20_809-19insTGTA
LRG_388:g.9412_9413insATGT
NG_007553.1:g.9412_9413insATGT
NC_000015.10:g.34791317_34791318insTACA
NC_000015.9:g.35083515_35083516insACAT
NC_000015.9:g.35083518_35083519insTACA
More...
07/31/2021
intron variant
likely benign
ACTC1-Related Familial Hypertrophic Cardiomyopathy; Atrial septal defect 5; Dilated cardiomyopathy 1R; Familial hypertrophic cardiomyopathy 11
Imported Disease Annotations - ClinVar
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CV1645074
Human
hypertrophic cardiomyopathy 11
IAGP
8554872
ClinVar Annotator: match by term: Hypertrophic cardiomyopathy 11
ClinVar
PMID:28492532
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Disease Annotations
Click to see Annotation Summary View
1 to 1 of 1 rows
10
20
30
40
100
All Rows
hypertrophic cardiomyopathy 11
(IAGP)
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Variant Details
.
Variant Samples
1 to 1 of 1 rows
10
20
30
40
100
All Rows
ClinVar GRCh37
ClinVar GRCh38
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Additional References at PubMed
1 to 1 of 1 rows
10
20
30
40
100
All Rows
PMID:
28492532
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Additional Information
External Database Links
1 to 9 of 9 rows
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
ClinVar
RCV002149360
CLINVAR
dbSNP (RS)
rs1194538397
CLINVAR
MedGen
C2677506
CLINVAR
NCBI Gene
ACTC1
CLINVAR
GJD2-DT
CLINVAR
OMIM
102540
CLINVAR
612098
CLINVAR
612794
CLINVAR
613424
CLINVAR
1 to 9 of 9 rows
3
5
10
20
40
100
All Rows