rs142832090 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Variant: rs142832090 -  Homo sapiens

RGD ID: 152078068
RS ID: rs142832090
ClinVar ID: CV1661168
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SLC26A5  
Reference Nucleotide: A
Variant Nucleotide: G
Position
Assembly Chr Position
GRCh37 7 103,030,863
GRCh38 7 103,390,416
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001167962.2:c.1311+13T>C
NM_001321787.2:c.1311+13T>C
NM_198999.3:c.1311+13T>C
NM_206883.3:c.1311+13T>C
More... 		11/08/2023 intron variant likely benign none provided

Variant Details
Variant Transcripts
Gene Symbol:SLC26A5
Accession:NM_206885
Location:INTRON

Gene Symbol:SLC26A5
Accession:NM_198999
Location:INTRON

Gene Symbol:SLC26A5
Accession:XM_047420347
Location:INTRON

Gene Symbol:SLC26A5
Accession:NM_001167962
Location:INTRON

Gene Symbol:SLC26A5
Accession:NM_206883
Location:INTRON

Gene Symbol:SLC26A5
Accession:NM_206884
Location:INTRON

Gene Symbol:SLC26A5
Accession:NM_001321787
Location:INTRON

Gene Symbol:SLC26A5
Accession:XM_011516170
Location:INTRON

Gene Symbol:SLC26A5
Accession:NR_120442
Location:INTRON;NON-CODING

Gene Symbol:SLC26A5
Accession:NR_120443
Location:INTRON;NON-CODING

Gene Symbol:SLC26A5
Accession:NR_120441
Location:INTRON;NON-CODING

Gene Symbol:SLC26A5
Accession:NR_135802
Location:INTRON;NON-CODING

Gene Symbol:SLC26A5
Accession:XR_007060034
Location:INTRON;NON-CODING

Gene Symbol:SLC26A5
Accession:NR_135801
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV002130490 CLINVAR
dbSNP (RS) rs142832090 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene SLC26A5 CLINVAR
OMIM 604943 CLINVAR