rs1836590086 Rat Genome Database
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Summary
Annotation
ClinVar Data
Imported Disease - ClinVar
Variant Details
Variant Samples
PubMed References
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Variant: rs1836590086 - Homo sapiens
RGD ID:
151713765
RS ID:
rs1836590086
ClinVar ID:
CV1451154
Genic Status:
GENIC
Type:
deletion
(SO:0000159)
Associated Genes:
SURF1
Reference Nucleotide:
CGCAGCCCCAGCTGCAA
Variant Nucleotide:
-
Position
Assembly
Chr
Position
GRCh37
9
136,223,296 - 136,223,313
GRCh38
9
133,356,420 - 133,356,437
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
ClinVar Data
HGVS Name(s)
Last Evaluated
Molecular Consequence
Clinical Significance
Trait Synonyms
NG_008477.1:g.5051_5067del
NC_000009.11:g.136223302_136223318del
NM_001280787.1:c.-257_-241del
NM_003172.4:c.19_35del
NP_003163.1:p.Leu7fs
NC_000009.12:g.133356426_133356442del
NC_000009.11:g.136223295_136223311del
More...
09/01/2021
5 prime utr variant
pathogenic
Leigh Disease; LEIGH SYNDROME, NUCLEAR; Leigh's disease; Leigh's necrotizing encephalopathy; Leigh's syndrome; Necrotizing encephalopathy infantile subacute of Leigh; Subacute necrotizing encephalopathy
Imported Disease Annotations - ClinVar
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CV1451154
Human
Leigh disease
IAGP
8554872
ClinVar Annotator: match by term: Leigh syndrome
ClinVar
PMID:10443880
more ...
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Disease Annotations
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Leigh disease
(IAGP)
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Variant Details
.
Variant Samples
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ClinVar GRCh37
ClinVar GRCh38
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Additional References at PubMed
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PMID:
10443880
PMID:
22488715
PMID:
27848944
PMID:
28492532
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Additional Information
External Database Links
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Database
Acc Id
Source(s)
ClinVar
RCV002002511
CLINVAR
dbSNP (RS)
rs1836590086
CLINVAR
MedGen
C2931891
CLINVAR
NCBI Gene
SURF1
CLINVAR
OMIM
185620
CLINVAR
256000
CLINVAR
SNOMED CT
29570005
CLINVAR
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