RGD:150491904 Rat Genome Database

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Variant: RGD:150491904 -  Homo sapiens

RGD ID: 150491904
RS ID: rs76528848
ClinVar ID: CV1238078
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CCDC33  STRA6  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 15 74,500,053
GRCh38 15 74,207,712
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001199040.2:c.96+1647G>A
NM_001142617.2:c.-16+1088G>A
NM_001142619.2:c.-16+1088G>A
NM_001142620.2:c.-16+1088G>A
More... 		05/21/2021 intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:STRA6
Accession:XM_011521883
Location:5UTRS;INTRON

Gene Symbol:STRA6
Accession:NM_001142620
Location:5UTRS;INTRON

Gene Symbol:CCDC33
Accession:XM_047433141
Location:5UTRS;INTRON

Gene Symbol:STRA6
Accession:NM_001142619
Location:5UTRS;INTRON

Gene Symbol:STRA6
Accession:NM_001142617
Location:5UTRS;INTRON

Gene Symbol:STRA6
Accession:XM_017022479
Location:5UTRS;INTRON

Gene Symbol:STRA6
Accession:NM_001199041
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 5
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MDSQGDWAAQEKGQRMSSQPAGNQTSPGATEDYSYGSWYIDEPQGGEELQPEGEVPSCHTSIPPGLYHACLASLSILVLL
LLAMLVRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAVPAAVFMVLLSSLCLLLPDEDALPFLTLASAPSQDGKTEAPRGA
WKILGLFYYAALYYPLAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKIYKYYSLLASLPLLLGLGFLSLWYPV
QLVRSFSRRTGAGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHGFLSWARVCLRHCIYTPQPGFHLPLKLVLSATLTGT
AIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQEVVELVKHHLWALEVCYISALVLSCLLTFLVLMRSL
VTHRTNLRALHRGAALDLSPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQIIFFLGTTALAFLVLMPVLHGRNLLL
FRSLESSWPFWLTLALAVILQNMAAHWVFLETHDGHPQLTNRRVLYAATFLLFPLNVLVGAMVATWRVLLSALYNAIHLG
QMDLSLLPPRAATLDPGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRTMAAPQDSLRPGEEDEGMQLLQTKDSMA
KGARPGASRGRARWGLAYTLLHNPTLQVFRKTALLGANGAQP*

Gene Symbol:CCDC33
Accession:XM_017022630
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_005254692
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_011522085
Location:INTRON

Gene Symbol:STRA6
Accession:XM_017022478
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_011522086
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022631
Location:INTRON

Gene Symbol:CCDC33
Accession:NM_025055
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022628
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022623
Location:INTRON

Gene Symbol:STRA6
Accession:NM_001199040
Location:INTRON

Gene Symbol:CCDC33
Accession:NM_001287181
Location:INTRON

Gene Symbol:STRA6
Accession:XM_011521885
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_011522089
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022626
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022625
Location:INTRON

Gene Symbol:STRA6
Accession:NM_001199042
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022627
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_017022624
Location:INTRON

Gene Symbol:STRA6
Accession:NM_022369
Location:INTRON

Gene Symbol:STRA6
Accession:NM_001142618
Location:INTRON

Gene Symbol:CCDC33
Accession:NM_182791
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_047433142
Location:INTRON

Gene Symbol:CCDC33
Accession:XM_011522087
Location:INTRON

Gene Symbol:STRA6
Accession:XR_931877
Location:INTRON;NON-CODING

Gene Symbol:CCDC33
Accession:XR_001751401
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001654924 CLINVAR
dbSNP (RS) rs76528848 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene CCDC33 CLINVAR
  STRA6 CLINVAR
OMIM 610745 CLINVAR
  618525 CLINVAR