GWAS Catalog Study |
Disease Trait |
Study Size |
Risk Allele |
Risk Allele Frequency |
P Value |
P Value MLOG |
SNP Passing QC |
Reported Odds Ratio or Beta-coefficient |
Ontology Accession |
PubMed |
GCST004232 |
HDL cholesterol levels |
34,930 East Asian ancestry individuals, 187,167 European ancestry individuals |
A |
0.686 |
6E-39 |
38.221848749616356 |
Affymetrix, Illumina [~ 1900000] (imputed) |
0.0609 |
high density lipoprotein cholesterol measurement (EFO:0004612)
|
PMID:28334899 |
GCST90302125 |
Triglyceride levels in VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
1E-13 |
13.0 |
Affymetrix, Illumina, Perlegen [13388616] (imputed) |
0.031 |
triglyceride measurement (EFO:0004530) very low density lipoprotein cholesterol measurement (EFO:0008317)
|
PMID:38448586 |
GCST90302021 |
Cholesterol esters in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6256 |
4E-12 |
11.397940008672037 |
Affymetrix, Illumina, Perlegen [13388667] (imputed) |
0.029 |
cholesterol esters in large VLDL measurement (EFO:0022170)
|
PMID:38448586 |
GCST90302023 |
Free cholesterol in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
6E-10 |
9.221848749616356 |
Affymetrix, Illumina, Perlegen [13389212] (imputed) |
0.0258 |
free cholesterol in large VLDL measurement (EFO:0022265)
|
PMID:38448586 |
GCST90302004 |
Phospholipids to total lipids ratio in large HDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6282 |
4E-12 |
11.397940008672037 |
Affymetrix, Illumina, Perlegen [13337432] (imputed) |
0.0287 |
phospholipids:total lipids ratio (EFO:0020946) high density lipoprotein cholesterol measurement (EFO:0004612)
|
PMID:38448586 |
GCST90302041 |
Triglycerides in medium HDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6258 |
7E-17 |
16.154901959985743 |
Affymetrix, Illumina, Perlegen [13389004] (imputed) |
0.0348 |
triglycerides in medium HDL measurement (EFO:0022321)
|
PMID:38448586 |
GCST90302029 |
Triglycerides in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6256 |
2E-10 |
9.698970004336019 |
Affymetrix, Illumina, Perlegen [13389101] (imputed) |
0.0264 |
triglycerides in large VLDL measurement (EFO:0022178)
|
PMID:38448586 |
GCST90302019 |
Total Cholesterol in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
2E-11 |
10.698970004336019 |
Affymetrix, Illumina, Perlegen [13388926] (imputed) |
0.028 |
total cholesterol in large VLDL (EFO:0022177)
|
PMID:38448586 |
GCST90302026 |
Concentration of large VLDL particles |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
9E-11 |
10.045757490560675 |
Affymetrix, Illumina, Perlegen [13388958] (imputed) |
0.0271 |
very low density lipoprotein cholesterol measurement (EFO:0008317)
|
PMID:38448586 |
GCST90302025 |
Total lipids in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
8E-11 |
10.096910013008056 |
Affymetrix, Illumina, Perlegen [13389024] (imputed) |
0.0272 |
total lipids in large VLDL (EFO:0022175)
|
PMID:38448586 |
GCST90302027 |
Phospholipids in large VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
7E-11 |
10.154901959985743 |
Affymetrix, Illumina, Perlegen [13389052] (imputed) |
0.0272 |
phospholipids in VLDL measurement (EFO:0022301)
|
PMID:38448586 |
GCST008685 |
HDL cholesterol levels |
up to 23,761 African ancestry individuals, 13,171 Asian ancestry individuals, up to 90,272 European ancestry individuals, 6,620 Hispanic individuals |
A |
0.5802 |
1E-15 |
15.0 |
Affymetrix, Illumina, Perlegen [NR] (imputed) |
0.0092 |
high density lipoprotein cholesterol measurement (EFO:0004612)
|
PMID:30926973 |
GCST90302076 |
Serum total triglyceride levels |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
3E-13 |
12.522878745280337 |
Affymetrix, Illumina, Perlegen [13388737] (imputed) |
0.0305 |
triglyceride measurement (EFO:0004530)
|
PMID:38448586 |
GCST90302065 |
Phospholipids in medium VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
2E-13 |
12.698970004336019 |
Affymetrix, Illumina, Perlegen [13388783] (imputed) |
0.0308 |
phospholipids in VLDL measurement (EFO:0022301)
|
PMID:38448586 |
GCST90302067 |
Triglycerides in medium VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
3E-13 |
12.522878745280337 |
Affymetrix, Illumina, Perlegen [13389251] (imputed) |
0.0305 |
triglycerides in medium VLDL measurement (EFO:0022155)
|
PMID:38448586 |
GCST90302061 |
Free cholesterol in medium VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6258 |
8E-13 |
12.096910013008056 |
Affymetrix, Illumina, Perlegen [13389276] (imputed) |
0.0298 |
free cholesterol in medium VLDL measurement (EFO:0022269)
|
PMID:38448586 |
GCST90302064 |
Concentration of medium VLDL particles |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
1E-13 |
13.0 |
Affymetrix, Illumina, Perlegen [13388935] (imputed) |
0.0308 |
very low density lipoprotein cholesterol measurement (EFO:0008317)
|
PMID:38448586 |
GCST90302063 |
Total lipids in medium VLDL |
4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals |
A |
0.6257 |
2E-13 |
12.698970004336019 |
Affymetrix, Illumina, Perlegen [13388997] (imputed) |
0.0307 |
total lipids in medium VLDL (EFO:0022153)
|
PMID:38448586 |