rs76926687 Rat Genome Database

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Variant: rs76926687 -  Homo sapiens

RGD ID: 150405929
RS ID: rs76926687
ClinVar ID: CV1195608
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TANGO2  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 22 20,043,630
GRCh38 22 20,056,107
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001322174.2:c.157+94C>T
NM_001322175.2:c.157+94C>T
NM_001283199.3:c.380+2556C>T
NM_001283215.3:c.574+94C>T
More... 		05/10/2019 intron variant likely benign none provided
GWAS Catalog Data
GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG SNP Passing QC Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GCST007676 3-month functional outcome in ischaemic stroke (modified Rankin score) 3,830 European and unknown ancestry modified Rankin score 0-2 cases, 2,335 European and unknown ancestry modified Rankin score 3-6 cases T 0.017 0.000005 5.301029995663981 Affymetrix, Illumina [~ 8500000] (imputed) 2.72 stroke outcome severity measurement (EFO:0009603)
 PMID:30796134

Variant Details
Variant Transcripts
Gene Symbol:TANGO2
Accession:NM_001283215
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322148
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322144
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322172
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_017028585
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441131
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441126
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441127
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283106
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283148
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322174
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322146
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322143
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322150
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322173
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322167
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322171
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_017028580
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_017028577
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322142
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322175
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441130
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441122
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441132
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283116
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283235
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_017028579
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441120
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322147
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283248
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322153
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322155
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322166
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_017028586
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_152906
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441125
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283129
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322145
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283179
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441121
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441118
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441123
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441128
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441129
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283154
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283199
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001283186
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322141
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322149
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441124
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322163
Location:INTRON

Gene Symbol:TANGO2
Accession:XM_047441119
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322169
Location:INTRON

Gene Symbol:TANGO2
Accession:NM_001322160
Location:INTRON

Gene Symbol:TANGO2
Accession:NR_136211
Location:INTRON;NON-CODING

Gene Symbol:TANGO2
Accession:NR_136212
Location:INTRON;NON-CODING

Gene Symbol:TANGO2
Accession:NR_104274
Location:INTRON;NON-CODING

Gene Symbol:TANGO2
Accession:NR_104275
Location:INTRON;NON-CODING

Gene Symbol:TANGO2
Accession:NR_136206
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001571851 CLINVAR
dbSNP (RS) rs76926687 CLINVAR
GWAS Catalog GCST007676 GWAS Catalog
MedGen C3661900 CLINVAR
NCBI Gene TANGO2 CLINVAR
OMIM 616830 CLINVAR