RGD:11653570 Rat Genome Database

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Variant: RGD:11653570 -  Homo sapiens

RGD ID: 11653570
RS ID: rs886058974
ClinVar ID: CV291883
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TACR3  TACR3-AS1  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 4 104,511,049
GRCh38 4 103,589,892
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NG_023344.1:g.134925G>A
NC_000004.12:g.103589892C>T
NC_000004.11:g.104511049C>T
NP_001050.1:p.Arg396=
More... 		06/14/2016 synonymous variant uncertain significance HYPOGONADOTROPIC HYPOGONADISM 11 WITHOUT ANOSMIA
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:TACR3
Accession:NM_001059
Location:EXON
Amino Acid Prediction: R to R (synonymous)
Amino Acid Position: 396
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MATLPAAETWIDGGGGVGADAVNLTASLAAGAATGAVETGWLQLLDQAGNLSSSPSALGLPVASPAPSQPWANLTNQFVQ
PSWRIALWSLAYGVVVAVAVLGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASMAAFNTLVNFIYALHSEWYFGANYCRF
QNFFPITAVFASIYSMTAIAVDRYMAIIDPLKPRLSATATKIVIGSIWILAFLLAFPQCLYSKTKVMPGRTLCFVQWPEG
PKQHFTYHIIVIILVYCFPLLIMGITYTIVGITLWGGEIPGDTCDKYHEQLKAKRKVVKMMIIVVMTFAICWLPYHIYFI
LTAIYQQLNRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFRAGFKRAFRWCPFIKVSSYDELELKTTRFHPNRQSSM
YTVTRMESMTVVFDPNDADTTRSSRKKRATPRDPSFNGCSRRNSKSASATSSFISSPYTSVDEYS*

Gene Symbol:TACR3-AS1
Accession:NR_186501
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000311562 CLINVAR
dbSNP (RS) rs886058974 CLINVAR
MedGen C3553844 CLINVAR
NCBI Gene TACR3 CLINVAR
  TACR3-AS1 CLINVAR
OMIM 162332 CLINVAR
  614840 CLINVAR