Strain Report - Rat Genome Database

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Strain: SS.BN-(rs13453786-rs66377062)/Aek

Symbol: SS.BN-(rs13453786-rs66377062)/Aek
Strain: SS.BN-(rs13453786-rs66377062)
Substrain: Aek
RGD ID: 7364927
Citation ID: RRID:RRRC_00684
Ontology ID: RS:0003533
Also Known As: SS.BN-(rs13453786-rs66377062)/Aek; SS-2BNa
Type: congenic
Available Source: Rat Resource and Research Center
Origination: Rat Resource and Research Center
Description: This congenic strain contains a fragment of chromosome 2 of the SS-Chr 2BN/Mcwi from ~95 to 219 Mb transferred to the SS/JrHsdMcwi strain background.
Last Known Status: Cryopreserved Sperm (as of 2019-02-19)
Research Usage cardiac ischemia
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02231,460,803 - 255,813,030RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02250,808,785 - 274,502,259RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42224,440,703 - 248,978,273RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (rs13453786)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02231,460,803 - 231,460,803RGD
Rnor_5.02250,808,785 - 250,808,785RGD
RGSC_v3.42224,440,703 - 224,440,703RGD
Celera2207,934,340 - 207,934,340RGD

Flank 2 / 1 (rs66377062)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02255,813,030 - 255,813,030RGD
Rnor_5.02274,502,259 - 274,502,259RGD
RGSC_v3.42248,978,273 - 248,978,273RGD
Celera2231,510,781 - 231,510,781RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease It also has lower baseline blood pressure and is resistant to blood pressure rises on a high salt diet 2292495
strain_reproduction This strain is very good breeders producing large litters. Good dams. Some mastitis issues at weaning with the largest litters. 2292495
Database Acc Id Source(s)