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Strain Registration

Strain: SS-Bcat1em2Mcwi

Symbol: SS-Bcat1em2Mcwi
Strain: SS-Bcat1em2
Substrain: Mcwi
RGD ID: 6484716
Citation ID: RRID:RGD_6484716
Ontology ID: RS:0003285
Alleles: Bcat1em2Mcwi
Previously known as: SS-Bcat1em2Mcwi
Type: mutant
Source: PhysGen Knockouts
Origin: This strain was produced by injecting ZFNs targeting the sequence CAGTCTGTACATCCGCCCCacattCATCGGGATTGAGGTA into SS/JrHsdMcwi rat embryos. The resulting mutation is 15-bp deletion in exon 5
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24177,964,834 - 178,046,573RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04179,289,184 - 179,289,198RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04243,444,839 - 243,491,574RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.44182,641,517 - 182,692,917RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Bcat1em2Mcwi-var1 chr4 179289184 179289198 GATGAATGTGGGGCG - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-03 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Name updated 68913 APPROVED
2014-04-03 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Bcat1em2Mcwi    SS-Bcat1em2Mcwi    Name updated 68913 APPROVED