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Strain Registration

Strain: DA.PVG.1AV1-(D1Rat248-D1Rat10)/Kini

Symbol: DA.PVG.1AV1-(D1Rat248-D1Rat10)/Kini
Strain: DA.PVG.1AV1-(D1Rat248-D1Rat10)
Substrain: Kini
RGD ID: 4889450
Citation ID: RRID:RGD_4889450
Ontology ID: RS:0002494
Also Known As: DA.PVG.1AV1-(D1Rat248-D1Rat10)/Kini;DA.PVG-Eae29;DA.PVG-Eae29;Dc1P;D1cP; DA.PVG.1AV1-(D1Rat248-D1Rat10)/Kini
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Neuroimmunology Unit, Karolinska Institutet, Stockholm, Sweden
Description: DA/ZtmKini females were mated with PVG.1AV1/Kini males that had PVG allele within the Eae29 region, one breeding pair from N7 generation was intercrossed to give homozygous congenic that had PVG allele from the begining of chr1 to D1Rat10 (approximately 25.4 Mb)
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.215,925,877 - 24,697,545RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.015,655,772 - 85,706,974RGD_MAPPER_PIPELINERnor6.0
Rnor_5.017,306,802 - 86,917,075RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.416,253,932 - 25,271,177RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. IL-22RA2 Associates with Multiple Sclerosis and Macrophage Effector Mechanisms in Experimental Neuroinflammation. Beyeen AD, etal., J Immunol. 2010 Dec 1;185(11):6883-6890. Epub 2010 Nov 1.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Rat248)
Rat AssemblyChrPosition (strand)Source
mRatBN7.215,925,877 - 5,926,118 (+)MAPPER
Rnor_6.015,655,772 - 5,656,012NCBI
Rnor_5.017,306,802 - 7,307,042UniSTS
RGSC_v3.416,253,950 - 6,254,188UniSTS
RGSC_v3.416,253,932 - 6,254,263RGD
RGSC_v3.116,253,950 - 6,254,188RGD
Celera14,440,935 - 4,441,167UniSTS
RH 3.4 Map1105.3RGD
RH 3.4 Map1105.3UniSTS
RH 2.0 Map10.0RGD
SHRSP x BN Map14.7199RGD

Flank 2 / 1 (D1Rat10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2124,697,417 - 24,697,545 (+)MAPPER
Rnor_6.0185,706,847 - 85,706,974NCBI
Rnor_5.0186,916,948 - 86,917,075UniSTS
RGSC_v3.4125,271,049 - 25,271,177RGD
RGSC_v3.4125,271,050 - 25,271,177UniSTS
RGSC_v3.1125,273,995 - 25,274,122RGD
Celera123,392,537 - 23,392,664UniSTS
RH 3.4 Map1252.6UniSTS
RH 3.4 Map1252.6RGD
RH 2.0 Map1176.0RGD
SHRSP x BN Map115.98RGD
FHH x ACI Map121.7699RGD
Strain QTL Data
Symbol Name Trait
Eae29 Experimental allergic encephalomyelitis QTL 29 nervous system integrity trait   (VT:0010566)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other Expression of Il22ra2 was reduced in this congenic strain 4888518