Strain Report - Rat Genome Database

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Strain: DA.WF-(D1Mit1-D1Mit3)/Kop

Symbol: DA.WF-(D1Mit1-D1Mit3)/Kop
Strain: DA.WF-(D1Mit1-D1Mit3)
Substrain: Kop
RGD ID: 2304121
Citation ID: RRID:RGD_2304121
Ontology ID: RS:0001850
Previously known as: NBRP Rat No: 0265; DA.WF-(D1Mit1-D1Mit3)/Kop; DA.WF-Tcas6/Kop; DA.WF-Tcas6; /i>/Kop; DA.WF-Tscc2; DWTscc2; NBRP Rat No: 0265; DA.WF-(D1Mit1-D1Mit3)/Kop
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: This congenic strain in the DA background by introgressing a segment from WF
Coat Color: Albino
Inbred Generations: F22
Last Known Status: Cryopreserved Embryo
Research Usage Cancer
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21144,267,353 - 144,267,916RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01156,446,196 - 156,446,783RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01162,692,213 - 162,692,800RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41146,971,846 - 146,971,983RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue carcinogenesis in the rat. Tanuma J, etal., Cancer Res 1998 Apr 15;58(8):1660-4
4. Five quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue cancer in the rat. Tanuma JI, etal., Jpn J Cancer Res 2001 Jun;92(6):610-6.

Region

Position Markers

Flank 1 / 1 (D1Mit1)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.1156,717,951 - 56,718,312RGD
RH 3.4 Map1683.1RGD
RH 3.4 Map1683.1UniSTS
RH 2.0 Map1413.3RGD
SHRSP x BN Map132.6799RGD

Flank 2 / 1 (D1Mit3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21144,267,353 - 144,267,490 (-)MAPPER
mRatBN7.21144,267,353 - 144,267,916 (-)MAPPER
Rnor_6.01156,446,647 - 156,446,783NCBI
Rnor_6.01156,446,196 - 156,446,783NCBI
Rnor_5.01162,692,213 - 162,692,800UniSTS
Rnor_5.01162,692,664 - 162,692,800UniSTS
RGSC_v3.41146,971,846 - 146,971,983RGD
RGSC_v3.41146,971,847 - 146,971,983UniSTS
RGSC_v3.11147,050,253 - 147,050,389RGD
Celera1142,487,594 - 142,487,730UniSTS
RH 3.4 Map11128.0UniSTS
RH 3.4 Map11128.0RGD
RH 2.0 Map1740.1RGD
SHRSP x BN Map175.6399RGD
FHH x ACI Map167.73RGD
Cytogenetic Map1 RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-15 DA.WF-(D1Mit1-D1Mit3)/Kop    DA.WF-(D1Mit1-D1Mit3)/Kop    Name updated 68913 APPROVED
2012-05-15 DA.WF-(D1Mit1-D1Mit3)/Kop    DA.WF-(D1Mit1-D1Mit3)/Kop    Name updated 68913 APPROVED