Strain Report - Rat Genome Database

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Strain: SS.SHR-(D9Mco74-D9Rat64)/Mco

Symbol: SS.SHR-(D9Mco74-D9Rat64)/Mco
Strain: SS.SHR-(D9Mco74-D9Rat64)
Substrain: Mco
RGD ID: 2303150
Citation ID: RRID:RGD_2303150
Ontology ID: RS:0002202
Also Known As: SS.SHR-(D9Mco74-D9Rat64)/Mco;S.SHR(9)x7A; SS.SHR-(D9Mco74-D9Rat64)/Mco
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: This is a congenic substrain developed by crossing SS.SHR-(D9Wox16-D9Rat64)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2928,806,563 - 92,491,790RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0932,677,807 - 99,041,268RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0931,484,855 - 98,715,585RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4925,174,989 - 91,131,755RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Blood pressure and proteinuria effects of multiple quantitative trait loci on rat chromosome 9 that differentiate the spontaneously hypertensive rat from the Dahl salt-sensitive rat. Toland EJ, etal., J Hypertens. 2008 Nov;26(11):2134-41.


Position Markers

Flank 1 / 1 (D9Mco74)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2928,806,563 - 28,806,740 (+)MAPPER
Rnor_6.0932,677,807 - 32,677,983NCBI
Rnor_5.0931,484,855 - 31,485,031UniSTS
RGSC_v3.4925,174,989 - 25,175,165UniSTS
Celera926,325,051 - 26,325,227UniSTS
Cytogenetic Map9 RGD

Flank 2 / 1 (D9Rat64)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2992,491,589 - 92,491,790 (+)MAPPER
Rnor_6.0999,041,068 - 99,041,268NCBI
Rnor_5.0998,715,385 - 98,715,585UniSTS
RGSC_v3.4991,131,330 - 91,131,755RGD
RGSC_v3.4991,131,536 - 91,131,736UniSTS
RGSC_v3.1991,336,305 - 91,336,505RGD
Celera990,031,087 - 90,031,287UniSTS
RH 3.4 Map9786.3UniSTS
RH 3.4 Map9786.3RGD
RH 2.0 Map9949.6RGD
SHRSP x BN Map960.2299RGD
FHH x ACI Map963.26RGD

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.SHR-(D9Mco74-D9Rat64)/Mco    SS.SHR-(D9Mco74-D9Rat64)/Mco    Name updated 68913 APPROVED
2013-08-28 SS.SHR-(D9Mco74-D9Rat64)/Mco    SS.SHR-(D9Mco74-D9Rat64)/Mco    Name updated 68913 APPROVED