Strain Report - Rat Genome Database

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Strain: SS.SHR-(D9Wox16-D9Mco73)/Mco

Symbol: SS.SHR-(D9Wox16-D9Mco73)/Mco
Strain: SS.SHR-(D9Wox16-D9Mco73)
Substrain: Mco
RGD ID: 2303149
Citation ID: RRID:RGD_2303149
Ontology ID: RS:0002204
Also Known As: SS.SHR-(D9Wox16-D9Mco73)/Mco;S.SHR(9)x3A; SS.SHR-(D9Wox16-D9Mco73)/Mco
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: This is a congenic substrain developed by crossing SS.SHR-(D9Wox16-D9Rat64)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2922,198,773 - 50,687,400RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0925,819,185 - 55,627,498RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0924,681,016 - 55,323,208RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4918,476,042 - 47,764,357RGD_MAPPER_PIPELINERGSC3.4

Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.SHR-(D9Wox16-D9Mco73)/Mco" (RS:0002204)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Blood pressure and proteinuria effects of multiple quantitative trait loci on rat chromosome 9 that differentiate the spontaneously hypertensive rat from the Dahl salt-sensitive rat. Toland EJ, etal., J Hypertens. 2008 Nov;26(11):2134-41.


Position Markers

Flank 1 / 1 (D9Wox16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2922,198,773 - 22,198,945 (+)MAPPER
Rnor_6.0925,819,185 - 25,819,356NCBI
Rnor_5.0924,681,016 - 24,681,187UniSTS
RGSC_v3.4918,476,043 - 18,476,214UniSTS
RGSC_v3.4918,476,042 - 18,476,214RGD
RGSC_v3.1918,473,364 - 18,473,536RGD
Celera919,782,099 - 19,782,270UniSTS
RH 3.4 Map9191.5UniSTS
RH 3.4 Map9191.5RGD
RH 2.0 Map9163.2RGD
Cytogenetic Map9 RGD

Flank 2 / 1 (D9Mco73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2950,687,152 - 50,687,400 (+)MAPPER
Rnor_6.0955,627,251 - 55,627,498NCBI
Rnor_5.0955,322,961 - 55,323,208UniSTS
RGSC_v3.4947,764,110 - 47,764,357UniSTS
Celera948,323,418 - 48,323,665UniSTS
Cytogenetic Map9q22UniSTS

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.SHR-(D9Wox16-D9Mco73)/Mco    SS.SHR-(D9Wox16-D9Mco73)/Mco    Name updated 68913 APPROVED
2013-08-28 SS.SHR-(D9Wox16-D9Mco73)/Mco    SS.SHR-(D9Wox16-D9Mco73)/Mco    Name updated 68913 APPROVED