Strain Report - Rat Genome Database

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Strain: SS.SHR-(D2Rat127- D2Rat230)/Mco

Symbol: SS.SHR-(D2Rat127- D2Rat230)/Mco
Strain: SS.SHR-(D2Rat127- D2Rat230)
Substrain: Mco
RGD ID: 150517550
Citation ID: RRID:RGD_150517550
Ontology ID: RS:0005069
Also Known As: S.SHR(2)X47; SS.SHR-(D2Rat127- D2Rat230)/Mco
Type: congenic
Available Source: Not Available
Origination: University of Toledo Toledo, Ohio
Description: This SS congenic carries the chromosomal fragment from the spontaneously hypertensive rat (SHR). Recombinant Progeny Testing (RPT) was used to fine-map the proteinuria locus. The congenic was developed from the recombinant families by fixing the transferred genomic interval (D2Rat127- D2Rat230) in the homozygous SHR/SHR state
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.02204,650,681 - 204,650,836RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42177,914,620 - 177,914,774RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Genetic variants in Arhgef11 are associated with kidney injury in the Dahl salt-sensitive rat. Williams JM, etal., Hypertension. 2012 Nov;60(5):1157-68. doi: 10.1161/HYPERTENSIONAHA.112.199240. Epub 2012 Sep 17.


Position Markers

Flank 1 / 1 (D2Rat127)
Rat AssemblyChrPosition (strand)Source
Rnor_5.02204,650,681 - 204,650,836NCBI
RGSC_v3.42177,914,620 - 177,914,774RGD
RGSC_v3.12177,864,593 - 177,864,883RGD
SHRSP x BN Map270.0198RGD
SHRSP x BN Map270.0198UniSTS

Flank 2 / 1 (D2Rat230)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.12180,666,055 - 180,666,359RGD
SHRSP x BN Map270.0198UniSTS
SHRSP x BN Map270.0198RGD

Additional Information