rs62105575 Rat Genome Database

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Variant: rs62105575 -  Homo sapiens

RGD ID: 406268391
RS ID: rs62105575
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SNTG2  
Reference Nucleotide: G
Variant Nucleotide: G
Position
Assembly Chr Position
GRCh38 2 1,341,624
JBrowse: View Region in Genome Browser (JBrowse)
Model



GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
None Available GCST90132988 Beer or cider consumption (glasses per month) (UKB data field 1578, 4420) 387,404 European ancestry individuals G 0.993408 4E-8 7.398 rs62105575 0.0791029 PMID:32193382

Variant Details
Variant Transcripts
Gene Symbol:SNTG2
Accession:XM_047444798
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004363
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004368
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004374
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004372
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004369
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004364
Location:INTRON

Gene Symbol:SNTG2
Accession:NM_018968
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004365
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004366
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004370
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_047444794
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004371
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_047444795
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004362
Location:INTRON

Gene Symbol:SNTG2
Accession:XM_017004361
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST90132988 GWAS Catalog