rs2871632 Rat Genome Database

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Variant: rs2871632 -  Homo sapiens

RGD ID: 151340820
RS ID: rs2871632
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ROBO1  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh38 3 79,364,200
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs2871632Humanmathematical ability  IAGP 405850206 GWAS_CATALOGPMID:30038396
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS761644_H GCST006568 Highest math class taken (MTAG) 811,539 European ancestry individuals A 0.5506 3E-8 7.523 rs2871632 0.0092 mathematical ability (EFO:0004875)
PMID:30038396

Variant Details
Variant Transcripts
Gene Symbol:ROBO1
Accession:NM_133631
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_017006985
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_011533980
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_047448661
Location:INTRON

Gene Symbol:ROBO1
Accession:NM_001145845
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_011533978
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_011533979
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_017006984
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_017006983
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_047448662
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_047448663
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_047448664
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_006713277
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_011533976
Location:INTRON

Gene Symbol:ROBO1
Accession:NM_002941
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_047448665
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_017006982
Location:INTRON

Gene Symbol:ROBO1
Accession:XM_011533977
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST006568 GWAS Catalog