rs12320537 Rat Genome Database

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Variant: rs12320537 -  Homo sapiens

RGD ID: 150336567
RS ID: rs12320537
ClinVar ID: CV1172461
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: B4GALNT1  
Reference Nucleotide: G
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 12 58,021,091
GRCh38 12 57,627,308
JBrowse: View Region in Genome Browser (JBrowse)
Model



HGVS Name(s)
Last Evaluated
Molecular Consequence
Clinical Significance
Trait Synonyms
NM_001276468.2:c.1219+310C>G
NM_001478.5:c.1384+310C>G
NG_033849.1:g.10932C>G
NC_000012.12:g.57627308G>C
More... 		06/26/2018 intron variant benign none provided
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CV1172461Humancortical thickness  IAGP 405850206 GWAS_CATALOGPMID:32310165
Data has come from the GWAS Catalog   
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1138281_H GCST010041 Cortical thickness 919 European ancestry individuals C 0.252 0.000001 6 rs12320537 0.034 cortical thickness (EFO:0004840)
 PMID:32310165

Gene Symbol:B4GALNT1
Accession:NM_001276469
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_005268773
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413982
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413971
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_024448928
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413977
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_047428680
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413980
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_047428682
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413974
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001478
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413978
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413973
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_011538147
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413984
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413968
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413981
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413967
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001276468
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413972
Location:INTRON

Gene Symbol:B4GALNT1
Accession:XM_047428681
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413969
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413970
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413983
Location:INTRON

Gene Symbol:B4GALNT1
Accession:NM_001413979
Location:INTRON

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Database
Acc Id
Source(s)
ClinVar RCV001541048 CLINVAR
dbSNP (RS) rs12320537 CLINVAR
GWAS Catalog GCST010041 GWAS Catalog
MedGen C3661900 CLINVAR
NCBI Gene B4GALNT1 CLINVAR
OMIM 601873 CLINVAR