GWAS1746292_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1746292_H (erythrocyte volume QTL GWAS1746292 (human)) Homo sapiens

Symbol: GWAS1746292_H
Name: erythrocyte volume QTL GWAS1746292 (human)
RGD ID: 598026993
Trait: erythrocyte volume
LOD Score: Not Available
P Value: 7.0E-22
Variance: Not Available
Position No map positions available.
Population Stats: Not Available



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1746292_HHumanerythrocyte volume  IAGPrs1801133405850206 GWAS_CATALOGPMID:39024449

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs1801133)
Human AssemblyChrPosition (strand)Source
GRCh38111,796,321 - 11,796,322RGD_MAPPER_PIPELINE



1 to 20 of 45 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1746292_H GCST90475474 mean corpuscular volume (MCV, minimum, inv-norm transformed) 407,355 European ancestry individuals G 0.6604 7E-22 21.155 rs1801133 0.02741 erythrocyte volume (OBA:0003460)
 PMID:39024449
GWAS1640349_H GCST90479674 mean corpuscular hemoglobin (MCH, minimum, inv-norm transformed) 114,836 African American or Afro-Caribbean individuals, 55,792 Hispanic or Latin American individuals, 5,944 East Asian ancestry individuals, 407,317 European ancestry individuals G 0.7014 9E-17 16.046 rs1801133 0.02785 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS1640792_H GCST90479672 mean corpuscular hemoglobin (MCH, maximum, inv-norm transformed) 114,852 African American or Afro-Caribbean individuals, 55,783 Hispanic or Latin American individuals, 5,942 East Asian ancestry individuals, 407,288 European ancestry individuals G 0.7014 4E-24 23.398 rs1801133 0.03511 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS1641137_H GCST90479673 mean corpuscular hemoglobin (MCH, mean, inv-norm transformed) 114,855 African American or Afro-Caribbean individuals, 55,792 Hispanic or Latin American individuals, 5,944 East Asian ancestry individuals, 407,342 European ancestry individuals G 0.7014 1E-21 21 rs1801133 0.03325 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS595926_H GCST000367 Homocysteine levels 13,974 European ancestry females A 0.33 8E-35 34.097 rs1801133 0.05 homocysteine measurement (EFO:0004578)
 PMID:20031578
GWAS1143560_H GCST007074 Red cell distribution width approximately 445,000 European ancestry individuals ? NR 1E-23 23 rs1801133 N/A Red cell distribution width (EFO:0009188)
 PMID:30595370
GWAS1150299_H GCST009597 Multiple sclerosis 14,802 European and unknown ancestry cases, 26,703 European and unknown ancestry controls G NR 2E-15 14.699 rs1801133 1.107052 PMID:31604244
GWAS1153307_H GCST006137 Serum folate levels 1,999 Han Chinese ancestry individuals ? NR 4E-19 18.398 rs1801133 N/A folic acid measurement (EFO:0005111)
 PMID:29953918
GWAS1654946_H GCST90475442 mean corpuscular hemoglobin (MCH, maximum, inv-norm transformed) 407,288 European ancestry individuals G 0.6604 3E-38 37.523 rs1801133 0.03699 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS1656459_H GCST90475446 mean corpuscular hemoglobin (MCH, mean, inv-norm transformed) 407,342 European ancestry individuals G 0.6604 2E-34 33.699 rs1801133 0.03547 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS1656568_H GCST90475450 mean corpuscular hemoglobin (MCH, minimum, inv-norm transformed) 407,317 European ancestry individuals G 0.6604 1E-24 24 rs1801133 0.02976 mean corpuscular hemoglobin concentration (EFO:0004528)
 PMID:39024449
GWAS1172151_H GCST006054 High altitude adaptation 3,008 Tibetan (founder/genetic isolate) individuals and 7,287 East Asian individuals A 0.333 6E-9 8.222 rs1801133 N/A high altitude adaptation (EFO:0009105)
 PMID:28373541
GWAS672149_H GCST002087 Homocysteine levels 44,147 European ancestry individuals A 0.34 4E-104 103.398 rs1801133 0.1583 homocysteine measurement (EFO:0004578)
 PMID:23824729
GWAS1186393_H GCST90002396 Mean reticulocyte volume 408,112 British individuals A 0.33642 1E-12 12 rs1801133 0.018249054 mean reticulocyte volume (EFO:0010701)
 PMID:32888494
GWAS1193097_H GCST007579 Serum folate levels 2,232 Irish ancestry individuals ? NR 3E-11 10.523 rs1801133 0.04932 folic acid measurement (EFO:0005111)
 PMID:30339177
GWAS1193099_H GCST007578 Plasma homocysteine levels 2,232 Irish ancestry individuals ? NR 1E-19 19 rs1801133 0.03087 homocysteine measurement (EFO:0004578)
 PMID:30339177
None Available GCST90479963 Folate-deficiency anemia (PheCode 281.13) 450 African American or Afro-Caribbean cases, 120,910 African American or Afro-Caribbean controls, 903 European ancestry cases, 449,159 European ancestry controls G 0.7091 3E-11 10.523 rs1801133 0.2882 PMID:39024449
GWAS1194208_H GCST009171 Homocysteine levels 1,208 European ancestry individuals ? NR 2E-11 10.699 rs1801133 N/A homocysteine measurement (EFO:0004578)
 PMID:23696881
GWAS1223945_H GCST90319528 Vitamin B9 levels 9,947 Han Chinese ancestry individuals, 294 individuals A NR 6E-14 13.222 rs1801133 0.12 folic acid measurement (EFO:0005111)
 PMID:37479695
GWAS1223951_H GCST90319530 Homocysteine levels 9,947 Han Chinese ancestry individuals, 294 individuals A NR 6E-69 68.222 rs1801133 0.26 homocysteine measurement (EFO:0004578)
 PMID:37479695
1 to 20 of 45 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST90475474 GWAS Catalog

Note Type Note Reference