GWAS1483335_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1483335_H (forced expiratory volume, environmental tobacco smoke exposure measurement QTL GWAS1483335 (human)) Homo sapiens

Symbol: GWAS1483335_H
Name: forced expiratory volume, environmental tobacco smoke exposure measurement QTL GWAS1483335 (human)
RGD ID: 597387261
Trait: forced expiratory volume, environmental tobacco smoke exposure measurement
Measurement Type: forced expiratory volume   (CMO:0000254)    
LOD Score: Not Available
P Value: 7.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38137,043,751 - 37,043,752RGD_MAPPER_PIPELINEGRCh38
GRCh37137,509,352 - 37,509,353RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1483335_HHumanforced expiratory volume  IAGPrs2859741405850206 GWAS_CATALOGPMID:28738859

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1483335_HHumanenvironmental tobacco smoke exposure measurement  IAGPrs2859741405850206 GWAS_CATALOGPMID:28738859
GWAS1483335_HHumanforced expiratory volume  IAGPrs2859741405850206 GWAS_CATALOGPMID:28738859

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs2859741)
Human AssemblyChrPosition (strand)Source
GRCh38137,043,751 - 37,043,752RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597387261GWAS1483335_Hforced expiratory volume, environmental tobacco smoke exposure measurement QTL GWAS1483335 (human)0.000007forced expiratory volume, environmental tobacco smoke exposure measurementforced expiratory volume (CMO:0000254)13704375137043752Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1483335_H GCST004800 Forced expiratory volume in 1 second (environmental tobacco smoke interaction) 10,817 European ancestry individuals T 0.45 0.000007 5.155 rs2859741 59.0 forced expiratory volume (EFO:0004314)
environmental tobacco smoke exposure measurement (EFO:0008361)
 PMID:28738859
Database
Acc Id
Source(s)
GWAS Catalog GCST004800 GWAS Catalog

Note Type Note Reference