GWAS1441966_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1441966_H (body mass index QTL GWAS1441966 (human)) Homo sapiens

Symbol: GWAS1441966_H
Name: body mass index QTL GWAS1441966 (human)
RGD ID: 597345892
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 5.0E-13
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38643,620,490 - 43,620,491RGD_MAPPER_PIPELINEGRCh38
GRCh37643,588,227 - 43,588,228RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1441966_HHumanbody mass index (BMI)  IAGPrs567230078405850206 GWAS_CATALOGPMID:37280435

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1441966_HHumanbody mass index  IAGPrs567230078405850206 GWAS_CATALOGPMID:37280435

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1320482POLHDNA polymerase eta64357618543620523Human


Peak: (rs567230078)
Human AssemblyChrPosition (strand)Source
GRCh38643,620,490 - 43,620,491RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597172616GWAS1268690_Hbody mass index QTL GWAS1268690 (human)7e-11body mass indexbody mass index (BMI) (CMO:0000105)64362049043620491Human
1358839MULTSCL5_HMultiple sclerosis susceptibility QTL 5 (human)Multiple sclerosis susceptibility61958431145584311Human
1358857MULTSCL19_HMultiple sclerosis susceptibility QTL 19 (human)Multiple sclerosis susceptibility61958431145584311Human
597345892GWAS1441966_Hbody mass index QTL GWAS1441966 (human)5e-13body mass indexbody mass index (BMI) (CMO:0000105)64362049043620491Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1441966_H GCST90301650 Body mass index 441,761 European ancestry individuals T NR 5E-13 12.302 rs567230078 0.0433615 body mass index (EFO:0004340)
 PMID:37280435
GWAS1740518_H GCST010988 Adult body size 453,169 European ancestry individuals T 0.973181 4E-9 8.398 rs567230078 0.0250634 body height (OBA:VT0001253)
 PMID:32376654
GWAS1268690_H GCST90018947 Body mass index 359,983 European ancestry individuals, 163,835 East Asian ancestry individuals A NR 7E-11 10.155 rs567230078 0.0469 body mass index (EFO:0004340)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90301650 GWAS Catalog

Note Type Note Reference