GWAS1434214_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1434214_H (diastolic blood pressure QTL GWAS1434214 (human)) Homo sapiens

Symbol: GWAS1434214_H
Name: diastolic blood pressure QTL GWAS1434214 (human)
RGD ID: 597338140
Trait: diastolic blood pressure
Measurement Type: diastolic blood pressure   (CMO:0000005)    
LOD Score: Not Available
P Value: 4.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382231,701,789 - 31,701,790RGD_MAPPER_PIPELINEGRCh38
GRCh372232,097,775 - 32,097,776RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1434214_HHumandiastolic blood pressure  IAGPrs6518754405850206 GWAS_CATALOGPMID:33230300

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1434214_HHumandiastolic blood pressure  IAGPrs6518754405850206 GWAS_CATALOGPMID:33230300

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1604500PRR14Lproline rich 14 like223168134731750132Human


Peak: (rs6518754)
Human AssemblyChrPosition (strand)Source
GRCh382231,701,789 - 31,701,790RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581529BP71_HBlood pressure QTL 71 (human)20.001Blood pressurepulse pressure221109496637094966Human
2289428BW313_HBody weight QTL 313 (human)2.090.0015Body weightBMI221134428437344284Human
597338140GWAS1434214_Hdiastolic blood pressure QTL GWAS1434214 (human)0.0000004diastolic blood pressurediastolic blood pressure (CMO:0000005)223170178931701790Human
597329526GWAS1425600_Hdiastolic blood pressure QTL GWAS1425600 (human)4e-08diastolic blood pressurediastolic blood pressure (CMO:0000005)223170178931701790Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1434214_H GCST90000059 Diastolic blood pressure 810,865 European ancestry individuals T 0.5099 4E-7 6.398 rs6518754 0.082537234 diastolic blood pressure (EFO:0006336)
 PMID:33230300
GWAS1425600_H GCST90292474 Diastolic blood pressure 1,164,961 European ancestry individuals T 0.5123 4E-8 7.398 rs6518754 0.07565624 diastolic blood pressure (EFO:0006336)
 PMID:33230300
Database
Acc Id
Source(s)
GWAS Catalog GCST90000059 GWAS Catalog

Note Type Note Reference