GWAS1416898_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1416898_H (educational attainment QTL GWAS1416898 (human)) Homo sapiens

Symbol: GWAS1416898_H
Name: educational attainment QTL GWAS1416898 (human)
RGD ID: 597320824
Trait: educational attainment
LOD Score: Not Available
P Value: 2.0E-23
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382229,484,784 - 29,484,785RGD_MAPPER_PIPELINEGRCh38
GRCh372229,880,773 - 29,880,774RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1416898_HHumaneducational attainment  IAGPrs165633405850206 GWAS_CATALOGPMID:35361970

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
736723NEFHneurofilament heavy chain222948021829491390Human


Peak: (rs165633)
Human AssemblyChrPosition (strand)Source
GRCh382229,484,784 - 29,484,785RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581529BP71_HBlood pressure QTL 71 (human)20.001Blood pressurepulse pressure221109496637094966Human
597320824GWAS1416898_Heducational attainment QTL GWAS1416898 (human)2e-23educational attainment222948478429484785Human
2289428BW313_HBody weight QTL 313 (human)2.090.0015Body weightBMI221134428437344284Human
597117169GWAS1213243_Hself reported educational attainment QTL GWAS1213243 (human)5e-12self reported educational attainment222948478429484785Human
597109738GWAS1205812_Hself reported educational attainment QTL GWAS1205812 (human)1e-12self reported educational attainment222948478429484785Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1416898_H GCST90105038 Educational attainment 3,037,499 European ancestry individuals A 0.7668 2E-23 22.699 rs165633 0.012333 educational attainment (EFO:0011015)
 PMID:35361970
GWAS1205812_H GCST006442 Educational attainment (years of education) up to 1,131,881 European ancestry individuals A 0.7575 1E-12 12 rs165633 0.0116 self reported educational attainment (EFO:0004784)
 PMID:30038396
GWAS1213243_H GCST006571 Educational attainment (MTAG) 1,311,438 European ancestry individuals A 0.7575 5E-12 11.302 rs165633 0.0106 self reported educational attainment (EFO:0004784)
 PMID:30038396
Database
Acc Id
Source(s)
GWAS Catalog GCST90105038 GWAS Catalog

Note Type Note Reference