GWAS1407272_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1407272_H (Stuttering QTL GWAS1407272 (human)) Homo sapiens

Symbol: GWAS1407272_H
Name: Stuttering QTL GWAS1407272 (human)
RGD ID: 597311198
Trait: Stuttering
LOD Score: Not Available
P Value: 9.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381433,476,045 - 33,476,046RGD_MAPPER_PIPELINEGRCh38
GRCh371433,945,251 - 33,945,252RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1407272_HHumanStuttering  IAGPrs11850646405850206 GWAS_CATALOGPMID:34861174

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1316218NPAS3neuronal PAS domain protein 3143293478533804173Human
155768679LOC127827356OCT4-NANOG hESC enhancer GRCh37_chr14:33944722-33945332143347551633476126Human


Peak: (rs11850646)
Human AssemblyChrPosition (strand)Source
GRCh381433,476,045 - 33,476,046RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597311198GWAS1407272_HStuttering QTL GWAS1407272 (human)0.0000009Stuttering143347604533476046Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1407272_H GCST90100564 Predicted developmental stuttering 1,853 African ancestry cases, 8,372 African ancestry controls ? NR 9E-7 6.046 rs11850646 0.217 Stuttering (HP:0025268)
 PMID:34861174
Database
Acc Id
Source(s)
GWAS Catalog GCST90100564 GWAS Catalog

Note Type Note Reference